RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PDE1AP54750 535 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 ALX1Q15699 326 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 LRIT3Q3SXY7 679 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 C1orf53Q5VUE5 145 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 FAM160B2Q86V87 743 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 CHST13Q8NET6 341 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 OTUD7AQ8TE49 926 aaPredicted RBP19.16■□□□□ 0.66
VMA21-202ENST00000370361 GMCL1Q96IK5 515 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 CRBNQ96SW2 442 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 SLC38A10Q9HBR0 1119 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 ANAPC4Q9UJX5 808 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 PLA2G6O60733 806 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 PRDM1O75626 825 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 BMP3P12645 472 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 AKR1A1P14550 325 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 STAT2P52630 851 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 TFAP4Q01664 338 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 MAMDC4Q6UXC1 1216 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 RNF180Q86T96 592 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 STK11IPQ8N1F8 1099 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 CHURC1Q8WUH1 139 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 DDX11Q96FC9 970 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 SEC62Q99442 399 aaKnown RBP19.15■□□□□ 0.66
VMA21-202ENST00000370361 NUP88Q99567 741 aaPredicted RBP19.15■□□□□ 0.66
VMA21-202ENST00000370361 LBHD1Q9BQE6 289 aaPredicted RBP19.15■□□□□ 0.66
VMA21-202ENST00000370361 UBE2OQ9C0C9 1292 aaKnown RBP19.15■□□□□ 0.66
VMA21-202ENST00000370361 ZMYM6O95789 1325 aa19.15■□□□□ 0.66
VMA21-202ENST00000370361 TSPY2A6NKD2 308 aa19.14■□□□□ 0.65
VMA21-202ENST00000370361 SYN1P17600 705 aa19.14■□□□□ 0.65
VMA21-202ENST00000370361 NT5C2P49902 561 aa19.14■□□□□ 0.65
VMA21-202ENST00000370361 SNX17Q15036 470 aa19.14■□□□□ 0.65
VMA21-202ENST00000370361 SLFN13Q68D06 897 aa19.14■□□□□ 0.65
VMA21-202ENST00000370361 RWDD1Q9H446 243 aaPredicted RBP19.14■□□□□ 0.65
VMA21-202ENST00000370361 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.14■□□□□ 0.65
VMA21-202ENST00000370361 DNAJC25-GNG10A0A024R161 153 aa19.13■□□□□ 0.65
VMA21-202ENST00000370361 PGK2P07205 417 aa19.13■□□□□ 0.65
VMA21-202ENST00000370361 PCP11498 1178 aaKnown RBP19.13■□□□□ 0.65
VMA21-202ENST00000370361 MFAP1P55081 439 aaKnown RBP19.13■□□□□ 0.65
VMA21-202ENST00000370361 TKFCQ3LXA3 575 aa19.13■□□□□ 0.65
VMA21-202ENST00000370361 GJC2Q5T442 439 aaPredicted RBP19.13■□□□□ 0.65
VMA21-202ENST00000370361 KIFC2Q96AC6 838 aa19.13■□□□□ 0.65
VMA21-202ENST00000370361 XPNPEP3Q9NQH7 507 aa19.13■□□□□ 0.65
VMA21-202ENST00000370361 ORC4O43929 436 aa19.12■□□□□ 0.65
VMA21-202ENST00000370361 SLC1A4P43007 532 aa19.12■□□□□ 0.65
VMA21-202ENST00000370361 RTP1P59025 263 aa19.12■□□□□ 0.65
VMA21-202ENST00000370361 LRRC41Q15345 812 aa19.12■□□□□ 0.65
VMA21-202ENST00000370361 MCMDC2Q4G0Z9 681 aa19.12■□□□□ 0.65
VMA21-202ENST00000370361 SLC39A5Q6ZMH5 540 aa19.12■□□□□ 0.65
VMA21-202ENST00000370361 LRRC47Q8N1G4 583 aaKnown RBP19.12■□□□□ 0.65
VMA21-202ENST00000370361 PHF24Q9UPV7 400 aa19.12■□□□□ 0.65
VMA21-202ENST00000370361 FGRP09769 529 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 FAM47AQ5JRC9 791 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 PRAMEF19Q5SWL8 479 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 RCSD1Q6JBY9 416 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 SMC5Q8IY18 1101 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 CPXCR1Q8N123 301 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 STAG1Q8WVM7 1258 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 TSEN34Q9BSV6 310 aaKnown RBP19.11■□□□□ 0.65
VMA21-202ENST00000370361 FAM184BQ9ULE4 1060 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 STX8Q9UNK0 236 aa19.11■□□□□ 0.65
VMA21-202ENST00000370361 ZNF865P0CJ78 1059 aaPredicted RBP19.1■□□□□ 0.65
VMA21-202ENST00000370361 NOVP48745 357 aa19.1■□□□□ 0.65
VMA21-202ENST00000370361 ATN1P54259 1190 aaPredicted RBP19.1■□□□□ 0.65
VMA21-202ENST00000370361 ANKRD35Q8N283 1001 aa19.1■□□□□ 0.65
VMA21-202ENST00000370361 PNMA2Q9UL42 364 aa19.1■□□□□ 0.65
VMA21-202ENST00000370361 SZT2Q5T011 3432 aa19.09■□□□□ 0.65
VMA21-202ENST00000370361 LAMA3Q16787 3333 aa19.09■□□□□ 0.65
VMA21-202ENST00000370361 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
VMA21-202ENST00000370361 FOXP2O15409 715 aa19.09■□□□□ 0.65
VMA21-202ENST00000370361 IKQ13123 557 aaPredicted RBP19.09■□□□□ 0.65
VMA21-202ENST00000370361 ABHD16BQ9H3Z7 469 aa19.09■□□□□ 0.65
VMA21-202ENST00000370361 ACAD9Q9H845 621 aa19.09■□□□□ 0.65
VMA21-202ENST00000370361 RAVER2Q9HCJ3 691 aaKnown RBP19.09■□□□□ 0.65
VMA21-202ENST00000370361 RIPK3Q9Y572 518 aa19.09■□□□□ 0.65
VMA21-202ENST00000370361 MOXD2PA6NHM9 499 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 RANBP6O60518 1105 aaKnown RBP19.08■□□□□ 0.64
VMA21-202ENST00000370361 DUSP11O75319 330 aaKnown RBP19.08■□□□□ 0.64
VMA21-202ENST00000370361 ADCYAP1R1P41586 468 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 ANO1Q5XXA6 986 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 CCDC129Q6ZRS4 1044 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 NUP133Q8WUM0 1156 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 DCAF4Q8WV16 495 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 OSBPL3Q9H4L5 887 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 SPC25Q9HBM1 224 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 TCP11L1Q9NUJ3 509 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 ISY1Q9ULR0 285 aaKnown RBP19.08■□□□□ 0.64
VMA21-202ENST00000370361 ATP11BQ9Y2G3 1177 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 DNAH12Q6ZR08 3092 aa19.08■□□□□ 0.64
VMA21-202ENST00000370361 SMCHD1A6NHR9 2005 aa19.07■□□□□ 0.64
VMA21-202ENST00000370361 SOX1O00570 391 aaPredicted RBP19.07■□□□□ 0.64
VMA21-202ENST00000370361 MYCNP04198 464 aaPredicted RBP19.07■□□□□ 0.64
VMA21-202ENST00000370361 RNF41Q9H4P4 317 aaPredicted RBP19.07■□□□□ 0.64
VMA21-202ENST00000370361 IL17RBQ9NRM6 502 aa19.07■□□□□ 0.64
VMA21-202ENST00000370361 CCDC171Q6TFL3 1326 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 ASB14A6NK59 587 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 TRIM6-TRIM34B2RNG4 842 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 HIP1O00291 1037 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 FGAP02671 866 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 CST5P28325 142 aaPredicted RBP19.06■□□□□ 0.64
VMA21-202ENST00000370361 MDM2Q00987 491 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms