RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 PTGDRQ13258 359 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 CCDC42Q96M95 316 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 UBAC1Q9BSL1 405 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 KRT23Q9C075 422 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 LRWD1Q9UFC0 647 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 ANO9A1A5B4 782 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 A6NNZ2 444 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 B4DLN1 442 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 H7C1D1 291 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 USO1O60763 962 aaKnown RBP16.06■□□□□ 0.16
PHTF1-204ENST00000369604 SSBP05455 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
PHTF1-204ENST00000369604 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 NAP1L1P55209 391 aaKnown RBP16.06■□□□□ 0.16
PHTF1-204ENST00000369604 TUBB8Q3ZCM7 444 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 ALS2CLQ60I27 953 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 IFNL3Q8IZI9 196 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 SPATA4Q8NEY3 305 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 CNNM2Q9H8M5 875 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 CAPN11Q9UMQ6 739 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 NBPF26B4DH59 902 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 CHUKO15111 745 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 VAV2P52735 878 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 NBPF10Q6P3W6 841 aaKnown RBP16.06■□□□□ 0.16
PHTF1-204ENST00000369604 LDHAL6AQ6ZMR3 332 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 NBPF15Q8N660 670 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 ZIM3Q96PE6 472 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 DNAJC7Q99615 494 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 CNNM1Q9NRU3 951 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
PHTF1-204ENST00000369604 MST1RQ04912 1400 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 LGALS16A8MUM7 142 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 MBD4O95243 580 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 RPN1P04843 607 aaKnown RBP16.05■□□□□ 0.16
PHTF1-204ENST00000369604 ACTN3Q08043 901 aaPredicted RBP16.05■□□□□ 0.16
PHTF1-204ENST00000369604 ZNF658Q5TYW1 1059 aaPredicted RBP16.05■□□□□ 0.16
PHTF1-204ENST00000369604 C8orf74Q6P047 294 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 KRT26Q7Z3Y9 468 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
PHTF1-204ENST00000369604 ARMT1Q9H993 441 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 RMND1Q9NWS8 449 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 SNX12Q9UMY4 172 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 KDM6AO15550 1401 aaPredicted RBP16.05■□□□□ 0.16
PHTF1-204ENST00000369604 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
PHTF1-204ENST00000369604 GPTP24298 496 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 SEC24CP53992 1094 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 TBC1D8BQ0IIM8 1120 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 NEDD9Q14511 834 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 TTC38Q5R3I4 469 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 ZNF654Q8IZM8 581 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 FAM89AQ96GI7 184 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 RNPC3Q96LT9 517 aaKnown RBP16.05■□□□□ 0.16
PHTF1-204ENST00000369604 STRBPQ96SI9 672 aaKnown RBP16.05■□□□□ 0.16
PHTF1-204ENST00000369604 STIM2Q9P246 746 aa16.05■□□□□ 0.16
PHTF1-204ENST00000369604 WNT7AO00755 349 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 LSP1P33241 339 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 APBA1Q02410 837 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 NFRKBQ6P4R8 1299 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 EMBQ6PCB8 327 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 SPATS2Q86XZ4 545 aaKnown RBP16.04■□□□□ 0.16
PHTF1-204ENST00000369604 CREG2Q8IUH2 290 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 FNBP4Q8N3X1 1017 aaPredicted RBP16.04■□□□□ 0.16
PHTF1-204ENST00000369604 MMGT1Q8N4V1 131 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 CCDC114Q96M63 670 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 V9GY48 417 aaPredicted RBP16.04■□□□□ 0.16
PHTF1-204ENST00000369604 KIF1CO43896 1103 aaKnown RBP16.04■□□□□ 0.16
PHTF1-204ENST00000369604 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
PHTF1-204ENST00000369604 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 TRIM58Q8NG06 486 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 N4BP2L2Q92802 583 aaPredicted RBP16.04■□□□□ 0.16
PHTF1-204ENST00000369604 MLXIPQ9HAP2 919 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 KLC4Q9NSK0 619 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
PHTF1-204ENST00000369604 FSBPO95073 299 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 MOCS3O95396 460 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 BMP15O95972 392 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 MCM7P33993 719 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 FNTAP49354 379 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 KLK7P49862 253 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 GUCY2FP51841 1108 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 SKOR1P84550 965 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 TCIRG1Q13488 830 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 UBE3CQ15386 1083 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 CCDC40Q4G0X9 1142 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 CEP85LQ5SZL2 805 aa16.04■□□□□ 0.16
PHTF1-204ENST00000369604 ZKSCAN4Q969J2 545 aaPredicted RBP16.04■□□□□ 0.16
PHTF1-204ENST00000369604 NUTM2BA6NNL0 878 aaPredicted RBP16.03■□□□□ 0.16
PHTF1-204ENST00000369604 NUTM2EB1AL46 878 aaPredicted RBP16.03■□□□□ 0.16
PHTF1-204ENST00000369604 PATL2C9JE40 543 aaKnown RBP16.03■□□□□ 0.16
PHTF1-204ENST00000369604 E7EVH7 732 aa16.03■□□□□ 0.16
PHTF1-204ENST00000369604 HPDP32754 393 aaPredicted RBP16.03■□□□□ 0.16
PHTF1-204ENST00000369604 ZNF473Q8WTR7 871 aaKnown RBP16.03■□□□□ 0.16
PHTF1-204ENST00000369604 PPANQ9NQ55 473 aaKnown RBP16.03■□□□□ 0.16
PHTF1-204ENST00000369604 SCP2P22307 547 aa16.03■□□□□ 0.16
PHTF1-204ENST00000369604 DNM2P50570 870 aa16.03■□□□□ 0.16
PHTF1-204ENST00000369604 MAATS1Q7Z4T9 603 aa16.03■□□□□ 0.16
PHTF1-204ENST00000369604 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms