RNA–Protein interactions for RNA: ENST00000369600.5

PHTF1-203, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-203ENST00000369600 CCT5P48643 541 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 DZIP3Q86Y13 1208 aaKnown RBP16.06■□□□□ 0.16
PHTF1-203ENST00000369600 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-203ENST00000369600 HAUS4Q9H6D7 363 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 SPATA31A3Q5VYP0 1347 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 NUP188Q5SRE5 1749 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 PDE2AO00408 941 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-203ENST00000369600 SEMA3EO15041 775 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 GTPBP6O43824 516 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-203ENST00000369600 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 ZNF658Q5TYW1 1059 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-203ENST00000369600 SND1Q7KZF4 910 aaKnown RBP eCLIP16.06■□□□□ 0.16
PHTF1-203ENST00000369600 MB21D1Q8N884 522 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-203ENST00000369600 SELENOOQ9BVL4 669 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 WDR17Q8IZU2 1322 aa16.06■□□□□ 0.16
PHTF1-203ENST00000369600 KRT86O43790 486 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 GNAT2P19087 354 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 GTF2A1P52655 376 aaPredicted RBP16.05■□□□□ 0.16
PHTF1-203ENST00000369600 ATP2C1P98194 919 aaPredicted RBP16.05■□□□□ 0.16
PHTF1-203ENST00000369600 SEC23AQ15436 765 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 ZNHIT6Q9NWK9 470 aaKnown RBP16.05■□□□□ 0.16
PHTF1-203ENST00000369600 MYO1AQ9UBC5 1043 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 LIG3P49916 1009 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 E2F4Q16254 413 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 PDXDC2PQ6P474 469 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 SRBD1Q8N5C6 995 aaKnown RBP16.05■□□□□ 0.16
PHTF1-203ENST00000369600 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 GLI3P10071 1580 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 WDR59Q6PJI9 974 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 IRF2BP1Q8IU81 584 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 COG1Q8WTW3 980 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 GOLGA6AQ9NYA3 693 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 MKRN1Q9UHC7 482 aaKnown RBP16.05■□□□□ 0.16
PHTF1-203ENST00000369600 TNS3Q68CZ2 1445 aa16.05■□□□□ 0.16
PHTF1-203ENST00000369600 ZNF142P52746 1687 aaPredicted RBP16.04■□□□□ 0.16
PHTF1-203ENST00000369600 GOLGA6BA6NDN3 693 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
PHTF1-203ENST00000369600 ZPR1O75312 459 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 PLEKP08567 350 aaPredicted RBP16.04■□□□□ 0.16
PHTF1-203ENST00000369600 FGFR2P21802 821 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 MAGEA9P43362 315 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 MTIF2P46199 727 aaKnown RBP16.04■□□□□ 0.16
PHTF1-203ENST00000369600 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 TRIM14Q14142 442 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 WDR93Q6P2C0 686 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 RRP36Q96EU6 259 aaKnown RBP16.04■□□□□ 0.16
PHTF1-203ENST00000369600 DDX60Q8IY21 1712 aaKnown RBP16.04■□□□□ 0.16
PHTF1-203ENST00000369600 TRPM3Q9HCF6 1732 aaPredicted RBP16.04■□□□□ 0.16
PHTF1-203ENST00000369600 MROH5Q6ZUA9 1318 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 CHD4Q14839 1912 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 USP17L12C9JPN9 530 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 USP17L21D6R901 530 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 CSGALNACT2Q8N6G5 542 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 FAM76AQ8TAV0 307 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 KAT14Q9H8E8 782 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 PKD1L3Q7Z443 1732 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 KCPQ6ZWJ8 1503 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 MYH10P35580 1976 aa16.04■□□□□ 0.16
PHTF1-203ENST00000369600 BMP15O95972 392 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 NOP2P46087 812 aaKnown RBP16.03■□□□□ 0.16
PHTF1-203ENST00000369600 TUBB4BP68371 445 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 HPS3Q969F9 1004 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 NHEJ1Q9H9Q4 299 aaPredicted RBP16.03■□□□□ 0.16
PHTF1-203ENST00000369600 LRWD1Q9UFC0 647 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 SAMM50Q9Y512 469 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 CDHR2Q9BYE9 1310 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 UBA7P41226 1012 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 NAP1L1P55209 391 aaKnown RBP16.03■□□□□ 0.16
PHTF1-203ENST00000369600 NPY5RQ15761 445 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 RMND1Q9NWS8 449 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 PSMD14O00487 310 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
PHTF1-203ENST00000369600 CYLC1P35663 651 aaPredicted RBP16.03■□□□□ 0.16
PHTF1-203ENST00000369600 FUT2Q10981 343 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 TROAPQ12815 778 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 TYW1BQ6NUM6 668 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 TUBGCP2Q9BSJ2 902 aa16.03■□□□□ 0.16
PHTF1-203ENST00000369600 LRRC10BA6NIK2 292 aa16.02■□□□□ 0.16
PHTF1-203ENST00000369600 LGALS16A8MUM7 142 aa16.02■□□□□ 0.16
PHTF1-203ENST00000369600 IGHMBP2P38935 993 aaKnown RBP16.02■□□□□ 0.16
PHTF1-203ENST00000369600 KRT83P78385 493 aa16.02■□□□□ 0.16
PHTF1-203ENST00000369600 ATP2B2Q01814 1243 aa16.02■□□□□ 0.16
PHTF1-203ENST00000369600 KIF5AQ12840 1032 aa16.02■□□□□ 0.16
PHTF1-203ENST00000369600 DEF6Q9H4E7 631 aa16.02■□□□□ 0.16
PHTF1-203ENST00000369600 MLXIPQ9HAP2 919 aa16.02■□□□□ 0.16
PHTF1-203ENST00000369600 JRKLQ9Y4A0 524 aa16.02■□□□□ 0.16
PHTF1-203ENST00000369600 LMTK3Q96Q04 1460 aa16.02■□□□□ 0.15
PHTF1-203ENST00000369600 H7C1D1 291 aa16.02■□□□□ 0.15
PHTF1-203ENST00000369600 PSMA7O14818 248 aa16.02■□□□□ 0.15
PHTF1-203ENST00000369600 SCG2P13521 617 aa16.02■□□□□ 0.15
PHTF1-203ENST00000369600 CKAP4Q07065 602 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms