RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PAPPA2Q9BXP8 1791 aa10.4□□□□□ -0.75
TPM3-213ENST00000368545 CCDC171Q6TFL3 1326 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 RPS12P25398 132 aaKnown RBP10.39□□□□□ -0.75
TPM3-213ENST00000368545 MZF1P28698 734 aaPredicted RBP10.39□□□□□ -0.75
TPM3-213ENST00000368545 SMTNP53814 917 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 INHBEP58166 350 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 RPS8P62241 208 aaKnown RBP10.39□□□□□ -0.75
TPM3-213ENST00000368545 UBE4AQ14139 1066 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 MTFR1Q15390 333 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 ZNF296Q8WUU4 475 aaPredicted RBP10.39□□□□□ -0.75
TPM3-213ENST00000368545 FAM227BQ96M60 508 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 CWC22Q9HCG8 908 aaKnown RBP10.39□□□□□ -0.75
TPM3-213ENST00000368545 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.39□□□□□ -0.75
TPM3-213ENST00000368545 STXBP5LQ9Y2K9 1186 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 CACNA1SQ13698 1873 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 A0A0D9SFI3 127 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 PDGFAP04085 211 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 CELF1Q92879 486 aaKnown RBP10.39□□□□□ -0.75
TPM3-213ENST00000368545 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 GLIS2Q9BZE0 524 aaPredicted RBP10.39□□□□□ -0.75
TPM3-213ENST00000368545 ANKRD2Q9GZV1 360 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 RAB6BQ9NRW1 208 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 HELLSQ9NRZ9 838 aa10.39□□□□□ -0.75
TPM3-213ENST00000368545 MCAMP43121 646 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 GRAPQ13588 217 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 CRY2Q49AN0 593 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 MCMDC2Q4G0Z9 681 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 SH3PXD2AQ5TCZ1 1133 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 ZSCAN25Q6NSZ9 544 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 GRAPLQ8TC17 118 aaPredicted RBP10.38□□□□□ -0.75
TPM3-213ENST00000368545 FBF1Q8TES7 1133 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 DCPSQ96C86 337 aaKnown RBP10.38□□□□□ -0.75
TPM3-213ENST00000368545 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.38□□□□□ -0.75
TPM3-213ENST00000368545 PRDM6Q9NQX0 595 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 MINPP1Q9UNW1 487 aa10.38□□□□□ -0.75
TPM3-213ENST00000368545 ZBTB24O43167 697 aaPredicted RBP10.37□□□□□ -0.75
TPM3-213ENST00000368545 TAF5LO75529 589 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 USP5P45974 858 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 USP48Q86UV5 1035 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 ZNF654Q8IZM8 581 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 RPGRQ92834 1020 aaKnown RBP10.37□□□□□ -0.75
TPM3-213ENST00000368545 HTATIP2Q9BUP3 242 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 SRA1Q9HD15 236 aaKnown RBP10.37□□□□□ -0.75
TPM3-213ENST00000368545 NR2E3Q9Y5X4 410 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 MYO5AQ9Y4I1 1855 aaKnown RBP10.37□□□□□ -0.75
TPM3-213ENST00000368545 LRRC37AA6NMS7 1700 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 K7ELQ4 463 aaPredicted RBP10.37□□□□□ -0.75
TPM3-213ENST00000368545 RNF113AO15541 343 aaKnown RBP10.37□□□□□ -0.75
TPM3-213ENST00000368545 ZAP70P43403 619 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 PHKA1P46020 1223 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 SCARF1Q14162 830 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 ZMYM1Q5SVZ6 1142 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 SDE2Q6IQ49 451 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 MAP4K1Q92918 833 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 CRAMP1Q96RY5 1269 aa10.37□□□□□ -0.75
TPM3-213ENST00000368545 ZNF804BA4D1E1 1349 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 GNRH1P01148 92 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 HOXA10P31260 410 aaPredicted RBP10.36□□□□□ -0.75
TPM3-213ENST00000368545 MCM2P49736 904 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 ARID5BQ14865 1188 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 CAVIN4Q5BKX8 364 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 EGFLAMQ63HQ2 1017 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 RASAL3Q86YV0 1011 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 NKX2-3Q8TAU0 364 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 RBM17Q96I25 401 aaKnown RBP10.36□□□□□ -0.75
TPM3-213ENST00000368545 ZNF408Q9H9D4 720 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 GNL3LQ9NVN8 582 aaKnown RBP10.36□□□□□ -0.75
TPM3-213ENST00000368545 HMG20BQ9P0W2 317 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 EIF1AYO14602 144 aaKnown RBP10.36□□□□□ -0.75
TPM3-213ENST00000368545 LILRA1O75019 489 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 ZKSCAN1P17029 563 aaPredicted RBP10.36□□□□□ -0.75
TPM3-213ENST00000368545 FSHRP23945 695 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 VARSP26640 1264 aaKnown RBP10.36□□□□□ -0.75
TPM3-213ENST00000368545 KCNJ4P48050 445 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 MMP14P50281 582 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 PTH1RQ03431 593 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 ZNF589Q86UQ0 364 aaPredicted RBP10.36□□□□□ -0.75
TPM3-213ENST00000368545 SPATA5Q8NB90 893 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 KCNB2Q92953 911 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 ANTXR1Q9H6X2 564 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 PALD1Q9ULE6 856 aa10.36□□□□□ -0.75
TPM3-213ENST00000368545 THSD4Q6ZMP0 1018 aa10.35□□□□□ -0.75
TPM3-213ENST00000368545 CYP2U1Q7Z449 544 aa10.35□□□□□ -0.75
TPM3-213ENST00000368545 APPBP2Q92624 585 aa10.35□□□□□ -0.75
TPM3-213ENST00000368545 RTFDC1Q9BY42 306 aaPredicted RBP10.35□□□□□ -0.75
TPM3-213ENST00000368545 RBM8AQ9Y5S9 174 aaKnown RBP10.35□□□□□ -0.75
TPM3-213ENST00000368545 OPLAHO14841 1288 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 CYP2E1P05181 493 aaPredicted RBP10.34□□□□□ -0.75
TPM3-213ENST00000368545 SKOR1P84550 965 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 RASGRF1Q13972 1273 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 NECTIN1Q15223 517 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 DSCC1Q9BVC3 393 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 KLK14Q9P0G3 267 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 SNX14Q9Y5W7 946 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 MAST3O60307 1309 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 PDS5AQ29RF7 1337 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms