RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 IVNS1ABPQ9Y6Y0 642 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 FRMPD3Q5JV73 1810 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 UNC80Q8N2C7 3258 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 ERCC3P19447 782 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
TPM3-210ENST00000368530 CNGA1P29973 690 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 RTP1P59025 263 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 SNX17Q15036 470 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
TPM3-210ENST00000368530 GJC2Q5T442 439 aaPredicted RBP11.74□□□□□ -0.53
TPM3-210ENST00000368530 SLC39A5Q6ZMH5 540 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 IL17RAQ96F46 866 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 DYNLL2Q96FJ2 89 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 CRNKL1Q9BZJ0 848 aaKnown RBP11.74□□□□□ -0.53
TPM3-210ENST00000368530 ADAMTS5Q9UNA0 930 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 TMX2Q9Y320 296 aa11.74□□□□□ -0.53
TPM3-210ENST00000368530 LAMA4Q16363 1823 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 PRKAB2O43741 272 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 NUBP1P53384 320 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 LRRFIP1Q32MZ4 808 aaKnown RBP11.73□□□□□ -0.53
TPM3-210ENST00000368530 ADCK5Q3MIX3 580 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 PRAMEF19Q5SWL8 479 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 VPS53Q5VIR6 699 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 TMEM179Q6ZVK1 233 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 DPP9Q86TI2 863 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 CLEC10AQ8IUN9 316 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 ABRAQ8N0Z2 381 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 OSBP2Q969R2 916 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 ATG4CQ96DT6 458 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 CHMP5Q9NZZ3 219 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 TAF6LQ9Y6J9 622 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 A0A0G2JMZ2 1700 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 ZNF236Q9UL36 1845 aa11.73□□□□□ -0.53
TPM3-210ENST00000368530 MPHOSPH10O00566 681 aaKnown RBP11.72□□□□□ -0.53
TPM3-210ENST00000368530 SEPT4O43236 478 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 ZFYP08048 801 aaPredicted RBP11.72□□□□□ -0.53
TPM3-210ENST00000368530 AKR1B1P15121 316 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 RNF20Q5VTR2 975 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 ANO1Q5XXA6 986 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 MB21D1Q8N884 522 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 KCNB2Q92953 911 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 TMX3Q96JJ7 454 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 TANGO6Q9C0B7 1094 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.53
TPM3-210ENST00000368530 MROH8Q9H579 483 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 ARMT1Q9H993 441 aa11.72□□□□□ -0.53
TPM3-210ENST00000368530 CYP2D7A0A087X1C5 515 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 ADD2P35612 726 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 TMEM132BQ14DG7 1078 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 SHHQ15465 462 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 NFKBIBQ15653 356 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 C12orf60Q5U649 245 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 C1orf53Q5VUE5 145 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 SPICE1Q8N0Z3 855 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 APPBP2Q92624 585 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 LBHD1Q9BQE6 289 aaPredicted RBP11.71□□□□□ -0.53
TPM3-210ENST00000368530 LARP6Q9BRS8 491 aaKnown RBP11.71□□□□□ -0.53
TPM3-210ENST00000368530 VCPKMTQ9H867 229 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 SWAP70Q9UH65 585 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 CYP46A1Q9Y6A2 500 aa11.71□□□□□ -0.53
TPM3-210ENST00000368530 TRIM43BA6NCK2 446 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 CDK8P49336 464 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 MCM2P49736 904 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 LRRC41Q15345 812 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 C9orf50Q5SZB4 431 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 ZSCAN25Q6NSZ9 544 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 SH3RF1Q7Z6J0 888 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 TICAM2Q86XR7 235 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 TRIM43Q96BQ3 446 aaPredicted RBP11.7□□□□□ -0.54
TPM3-210ENST00000368530 PUS7LQ9H0K6 701 aaKnown RBP11.7□□□□□ -0.54
TPM3-210ENST00000368530 ATP8A2Q9NTI2 1148 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 PDRG1Q9NUG6 133 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 ATP11BQ9Y2G3 1177 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 LTBP2Q14767 1821 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 USP17L21D6R901 530 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 FLOT1O75955 427 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 MBD4O95243 580 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 HSPD1P10809 573 aaKnown RBP11.7□□□□□ -0.54
TPM3-210ENST00000368530 ITGB8P26012 769 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 DDIT3P35638 169 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 ADCYAP1R1P41586 468 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 AK2P54819 239 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 ICA1Q05084 483 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 COL9A3Q14050 684 aaPredicted RBP11.7□□□□□ -0.54
TPM3-210ENST00000368530 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 FAM47AQ5JRC9 791 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 NCAPG2Q86XI2 1143 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 REPS2Q8NFH8 660 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 CCDC17Q96LX7 622 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 TTC14Q96N46 770 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
TPM3-210ENST00000368530 COL25A1Q9BXS0 654 aaPredicted RBP11.7□□□□□ -0.54
TPM3-210ENST00000368530 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 PDLIM7Q9NR12 457 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 FBXO28Q9NVF7 368 aa11.7□□□□□ -0.54
TPM3-210ENST00000368530 NAV1Q8NEY1 1877 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms