RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 CTNND2Q9UQB3 1225 aa8.73□□□□□ -1.01
CD46-207ENST00000367041 XDHP47989 1333 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 KCNJ18B7U540 433 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 DNM1LO00429 736 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 PDHBP11177 359 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 SLC8A3P57103 927 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 CDK17Q00537 523 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 XRCC4Q13426 336 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 BYSLQ13895 437 aaKnown RBP8.72□□□□□ -1.01
CD46-207ENST00000367041 TRIM29Q14134 588 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 KCNJ12Q14500 433 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 SNCBQ16143 134 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 PPP4R3AQ6IN85 833 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 TAX1BP1Q86VP1 789 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 VPS16Q9H269 839 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 CHD4Q14839 1912 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 C5orf60A6NFR6 353 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 H7C1W4 665 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 TOM1O60784 492 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 HSF2BPO75031 334 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 CIAO1O76071 339 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 KRT14P02533 472 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 RXRAP19793 462 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 IL15P40933 162 aaPredicted RBP8.72□□□□□ -1.01
CD46-207ENST00000367041 LIFRP42702 1097 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 FMNL3Q8IVF7 1028 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 CCDC170Q8IYT3 715 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 TAB2Q9NYJ8 693 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 TPX2Q9ULW0 747 aaKnown RBP8.72□□□□□ -1.01
CD46-207ENST00000367041 DUSP10Q9Y6W6 482 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
CD46-207ENST00000367041 KLHL33A6NCF5 533 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 ZNF263O14978 683 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 ZBTB43O43298 467 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 NBPF20Q3BBV1 942 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 GLE1Q53GS7 698 aaKnown RBP8.72□□□□□ -1.01
CD46-207ENST00000367041 LMBR1LQ6UX01 489 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 SHISA4Q96DD7 197 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 EPSTI1Q96J88 318 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 MTRQ99707 1265 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 CEP131Q9UPN4 1083 aa8.72□□□□□ -1.01
CD46-207ENST00000367041 IDEP14735 1019 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 NR1D1P20393 614 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 ATP1A2P50993 1020 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 SEC24CP53992 1094 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 SSRP1Q08945 709 aaKnown RBP8.71□□□□□ -1.01
CD46-207ENST00000367041 ANKRD20A8PQ5CZ79 823 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 TTLL7Q6ZT98 887 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 CYFIP2Q96F07 1278 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 NEUROD6Q96NK8 337 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 TRIM6Q9C030 488 aaPredicted RBP8.71□□□□□ -1.01
CD46-207ENST00000367041 TAOK2Q9UL54 1235 aa8.71□□□□□ -1.01
CD46-207ENST00000367041 ZNF335Q9H4Z2 1342 aaPredicted RBP8.71□□□□□ -1.02
CD46-207ENST00000367041 LCA5LO95447 670 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 AFMP43652 599 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 RCSD1Q6JBY9 416 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 CCDC70Q6NSX1 233 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 PDXDC2PQ6P474 469 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 WASF1Q92558 559 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 ATP6V1G3Q96LB4 118 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 SLC12A6Q9UHW9 1150 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 LUC7L2Q9Y383 392 aaKnown RBP8.71□□□□□ -1.02
CD46-207ENST00000367041 GPAA1O43292 621 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 VAV2P52735 878 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 ATP2B2Q01814 1243 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 PPARAQ07869 468 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 IFT88Q13099 833 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 PAK1Q13153 545 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 NR5A1Q13285 461 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 CDCA2Q69YH5 1023 aaPredicted RBP8.71□□□□□ -1.02
CD46-207ENST00000367041 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 CAGE1Q8TC20 777 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 ZNF483Q8TF39 744 aaPredicted RBP8.71□□□□□ -1.02
CD46-207ENST00000367041 SYMPKQ92797 1274 aaKnown RBP8.71□□□□□ -1.02
CD46-207ENST00000367041 NHEJ1Q9H9Q4 299 aaPredicted RBP8.71□□□□□ -1.02
CD46-207ENST00000367041 EBF2Q9HAK2 575 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 KCNJ14Q9UNX9 436 aa8.71□□□□□ -1.02
CD46-207ENST00000367041 SOS2Q07890 1332 aaPredicted RBP8.7□□□□□ -1.02
CD46-207ENST00000367041 GOLGA8AA7E2F4 631 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 HMGB1P1B2RPK0 211 aaPredicted RBP8.7□□□□□ -1.02
CD46-207ENST00000367041 EYA2O00167 538 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 COBLO75128 1261 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 DNAJC8O75937 253 aaPredicted RBP8.7□□□□□ -1.02
CD46-207ENST00000367041 PAEPP09466 180 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 FAM153BP0C7A2 387 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 SLC7A5Q01650 507 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 UBXN1Q04323 297 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 ICA1Q05084 483 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 FAM153CQ494X1 144 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 LRRC24Q50LG9 513 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 KCTD16Q68DU8 428 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 NAIF1Q69YI7 327 aaPredicted RBP8.7□□□□□ -1.02
CD46-207ENST00000367041 ZNF790Q6PG37 636 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 TRIM58Q8NG06 486 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 RNF217Q8TC41 542 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 OXER1Q8TDS5 423 aa8.7□□□□□ -1.02
CD46-207ENST00000367041 OSBPL9Q96SU4 736 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms