RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TMTC1Q8IUR5 882 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 CENPHQ9H3R5 247 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 SPEF2Q9C093 1822 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 CCDC196A0A1B0GTZ2 297 aa22.03■■□□□ 1.12
TRIM58-201ENST00000366481 MRPS25P82663 173 aaKnown RBP22.03■■□□□ 1.12
TRIM58-201ENST00000366481 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
TRIM58-201ENST00000366481 JADE2Q9NQC1 790 aa22.03■■□□□ 1.12
TRIM58-201ENST00000366481 FAM237AA0A1B0GTK4 181 aa22.03■■□□□ 1.12
TRIM58-201ENST00000366481 ERVV-1B6SEH8 477 aa22.03■■□□□ 1.12
TRIM58-201ENST00000366481 GNGT1P63211 74 aa22.03■■□□□ 1.12
TRIM58-201ENST00000366481 PPARDQ03181 441 aa22.03■■□□□ 1.12
TRIM58-201ENST00000366481 ZSCAN10Q96SZ4 725 aaPredicted RBP22.03■■□□□ 1.12
TRIM58-201ENST00000366481 STK36Q9NRP7 1315 aa22.03■■□□□ 1.12
TRIM58-201ENST00000366481 CCDC70Q6NSX1 233 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 TAB2Q9NYJ8 693 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 HPCAL4Q9UM19 191 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 CTNND2Q9UQB3 1225 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 PARP4Q9UKK3 1724 aaKnown RBP22.02■■□□□ 1.12
TRIM58-201ENST00000366481 ZEB2O60315 1214 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 MCM3P25205 808 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 PTGDRQ13258 359 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 CCDC122Q5T0U0 273 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 PAGE5Q96GU1 130 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 C8orf37Q96NL8 207 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 CTAGE1Q96RT6 745 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 RNF41Q9H4P4 317 aaPredicted RBP22.02■■□□□ 1.12
TRIM58-201ENST00000366481 CAPN7Q9Y6W3 813 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 KRT2P35908 639 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 SIK1P57059 783 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 SEC23AQ15436 765 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 DDB1Q16531 1140 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 SPATA1Q5VX52 437 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 ZNF384Q8TF68 577 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 MMS19Q96T76 1030 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 CXorf56Q9H5V9 222 aa22.02■■□□□ 1.12
TRIM58-201ENST00000366481 CAMTA2O94983 1202 aa22.01■■□□□ 1.11
TRIM58-201ENST00000366481 CYP26C1Q6V0L0 522 aa22.01■■□□□ 1.11
TRIM58-201ENST00000366481 CATIPQ7Z7H3 387 aa22.01■■□□□ 1.11
TRIM58-201ENST00000366481 CELF1Q92879 486 aaKnown RBP22.01■■□□□ 1.11
TRIM58-201ENST00000366481 GYPCP04921 128 aa22.01■■□□□ 1.11
TRIM58-201ENST00000366481 SARSP49591 514 aaKnown RBP22.01■■□□□ 1.11
TRIM58-201ENST00000366481 FAM98CQ17RN3 349 aaKnown RBP22.01■■□□□ 1.11
TRIM58-201ENST00000366481 GPKOWQ92917 476 aaPredicted RBP eCLIP22.01■■□□□ 1.11
TRIM58-201ENST00000366481 CAPS2Q9BXY5 557 aa22.01■■□□□ 1.11
TRIM58-201ENST00000366481 POLD4Q9HCU8 107 aa22.01■■□□□ 1.11
TRIM58-201ENST00000366481 SAR1BQ9Y6B6 198 aa22.01■■□□□ 1.11
TRIM58-201ENST00000366481 IPO7O95373 1038 aaKnown RBP22■■□□□ 1.11
TRIM58-201ENST00000366481 HNRNPH1P31943 449 aaKnown RBP22■■□□□ 1.11
TRIM58-201ENST00000366481 SND1Q7KZF4 910 aaKnown RBP eCLIP22■■□□□ 1.11
TRIM58-201ENST00000366481 GPIHBP1Q8IV16 184 aa22■■□□□ 1.11
TRIM58-201ENST00000366481 COG1Q8WTW3 980 aa22■■□□□ 1.11
TRIM58-201ENST00000366481 GNAT2P19087 354 aa22■■□□□ 1.11
TRIM58-201ENST00000366481 IRAK1P51617 712 aa22■■□□□ 1.11
TRIM58-201ENST00000366481 USP14P54578 494 aa22■■□□□ 1.11
TRIM58-201ENST00000366481 KAT2BQ92831 832 aa22■■□□□ 1.11
TRIM58-201ENST00000366481 JPH2Q9BR39 696 aaPredicted RBP22■■□□□ 1.11
TRIM58-201ENST00000366481 MYH7P12883 1935 aa22■■□□□ 1.11
TRIM58-201ENST00000366481 NDUFAB1O14561 156 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 NTSR2O95665 410 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 ERVK-24P63145 666 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 RNF187Q5TA31 235 aaPredicted RBP21.99■■□□□ 1.11
TRIM58-201ENST00000366481 KANK3Q6NY19 840 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 CHP1Q99653 195 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 GNL3LQ9NVN8 582 aaKnown RBP21.99■■□□□ 1.11
TRIM58-201ENST00000366481 PRDX5P30044 214 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 RDXP35241 583 aaKnown RBP21.99■■□□□ 1.11
TRIM58-201ENST00000366481 NLRP5P59047 1200 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 SRBD1Q8N5C6 995 aaKnown RBP21.99■■□□□ 1.11
TRIM58-201ENST00000366481 SELENOOQ9BVL4 669 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 ERCC5P28715 1186 aaPredicted RBP21.99■■□□□ 1.11
TRIM58-201ENST00000366481 EP400NLQ6ZTU2 488 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 IQCA1Q86XH1 822 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 OTUD6BQ8N6M0 293 aa21.99■■□□□ 1.11
TRIM58-201ENST00000366481 PCMTD1Q96MG8 357 aaPredicted RBP21.99■■□□□ 1.11
TRIM58-201ENST00000366481 RIOK1Q9BRS2 568 aaKnown RBP21.99■■□□□ 1.11
TRIM58-201ENST00000366481 ADD3Q9UEY8 706 aaKnown RBP21.99■■□□□ 1.11
TRIM58-201ENST00000366481 RRAGBQ5VZM2 374 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.98■■□□□ 1.11
TRIM58-201ENST00000366481 BANK1Q8NDB2 785 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 CPVLQ9H3G5 476 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 CEP131Q9UPN4 1083 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 ATP1A1P05023 1023 aaKnown RBP21.98■■□□□ 1.11
TRIM58-201ENST00000366481 XBP1P17861 261 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 UBXN1Q04323 297 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 CUL4BQ13620 913 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 TTC38Q5R3I4 469 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 PNPLA7Q6ZV29 1317 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 ANKRD18AQ8IVF6 992 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 TMTC2Q8N394 836 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 RASSF8Q8NHQ8 419 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 ABHD10Q9NUJ1 306 aa21.98■■□□□ 1.11
TRIM58-201ENST00000366481 EPN1Q9Y6I3 576 aaPredicted RBP21.98■■□□□ 1.11
TRIM58-201ENST00000366481 PP2D1A8MPX8 630 aa21.97■■□□□ 1.11
TRIM58-201ENST00000366481 RNF225M0QZC1 329 aaPredicted RBP21.97■■□□□ 1.11
TRIM58-201ENST00000366481 WDR93Q6P2C0 686 aa21.97■■□□□ 1.11
TRIM58-201ENST00000366481 SUGP1Q8IWZ8 645 aaKnown RBP21.97■■□□□ 1.11
TRIM58-201ENST00000366481 ATP1A2P50993 1020 aa21.97■■□□□ 1.11
TRIM58-201ENST00000366481 GIMAP7Q8NHV1 300 aa21.97■■□□□ 1.11
TRIM58-201ENST00000366481 MACROD2A1Z1Q3 448 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms