RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 POLA2Q14181 598 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 BSPRYQ5W0U4 402 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 PALM2Q8IXS6 379 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 TTC1Q99614 292 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 CYP2J2P51589 502 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 CHRNDQ07001 517 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 KIF9Q9HAQ2 790 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 TMEM94Q12767 1356 aa12.06□□□□□ -0.48
CLIP1-203ENST00000361654 EIF4A1P60842 406 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 ERFEQ4G0M1 354 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 BLIDQ8IZY5 108 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 RYBPQ8N488 228 aaPredicted RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 CACTINQ8WUQ7 758 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 DHX36Q9H2U1 1008 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 ANAPC5Q9UJX4 755 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 CPSF3Q9UKF6 684 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 MAPK8IP1Q9UQF2 711 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 NEURL1BA8MQ27 555 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 ATP5JP18859 108 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 PRPSAP1Q14558 356 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 HS1BP3Q53T59 392 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 C8orf74Q6P047 294 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 P3H4Q92791 437 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 M0R2C6 588 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 RNF8O76064 485 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 HHATQ5VTY9 493 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 MYOCDQ8IZQ8 938 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 SKA2Q8WVK7 121 aaPredicted RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 SNX25Q9H3E2 840 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.488e-7■■■■□ 22.7
CLIP1-203ENST00000361654 MYO1AQ9UBC5 1043 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 HEXIM1O94992 359 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 S100BP04271 92 aaPredicted RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 ARMCX5Q6P1M9 558 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 CCDC105Q8IYK2 499 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 SECISBP2LQ93073 1101 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 MRRFQ96E11 262 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 PSDA5PKW4 1024 aaPredicted RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 NOLC1Q14978 699 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 NEK8Q86SG6 692 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 MAP7D3Q8IWC1 876 aa12.05□□□□□ -0.48
CLIP1-203ENST00000361654 METTL14Q9HCE5 456 aaKnown RBP12.05□□□□□ -0.48
CLIP1-203ENST00000361654 SORBS3O60504 671 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 NPR1P16066 1061 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 ANXA13P27216 316 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 BPIFB4P59827 614 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 COA7Q96BR5 231 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 MYL10Q9BUA6 226 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 KANSL2Q9H9L4 492 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 THRAP3Q9Y2W1 955 aaKnown RBP12.04□□□□□ -0.48
CLIP1-203ENST00000361654 USP19O94966 1318 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 LMNB1P20700 586 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 SEPT12Q8IYM1 358 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 ANKRD36BP1Q96IX9 119 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 UIMC1Q96RL1 719 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 NUF2Q9BZD4 464 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 RIC8AQ9NPQ8 531 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 IRAK4Q9NWZ3 460 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 DDAH1O94760 285 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 Q3C1V9 767 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 UNC5CLQ8IV45 518 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 C10orf67Q8IYJ2 551 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 GANCQ8TET4 914 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 IGSF3O75054 1194 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 MYCP01106 439 aaPredicted RBP12.04□□□□□ -0.48
CLIP1-203ENST00000361654 CCND2P30279 289 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 ASPRV1Q53RT3 343 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 PEX26Q7Z412 305 aa12.04□□□□□ -0.48
CLIP1-203ENST00000361654 SEPT9Q9UHD8 586 aaPredicted RBP12.04□□□□□ -0.48
CLIP1-203ENST00000361654 DDX25Q9UHL0 483 aaKnown RBP12.04□□□□□ -0.48
CLIP1-203ENST00000361654 A6NJR5 290 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 CEP104O60308 925 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 GNAT1P11488 350 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 NEDD9Q14511 834 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 TMTC1Q8IUR5 882 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 NME8Q8N427 588 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 VPS54Q9P1Q0 977 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 INO80B-WBP1J3KQ70 363 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 PDE6CP51160 858 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 LRMPQ12912 555 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 TSTA3Q13630 321 aaPredicted RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 RPS6KA1Q15418 735 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 SEPT14Q6ZU15 432 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 IFT20Q8IY31 132 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 PPP4R1Q8TF05 950 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 FTOQ9C0B1 505 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 MTIF3Q9H2K0 278 aaKnown RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 ANKFY1Q9P2R3 1169 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 BCAP29Q9UHQ4 241 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 SRGAP2BP0DMP2 458 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms