RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 KLRF2D3W0D1 207 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 K7ELQ4 463 aaPredicted RBP14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 SMARCA1P28370 1054 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 ST3GAL1Q11201 340 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 CCL15Q16663 113 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 CCDC96Q2M329 555 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 TREML2Q5T2D2 321 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 TTBK2Q6IQ55 1244 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 LZTS2Q9BRK4 669 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 NCOA5Q9HCD5 579 aaKnown RBP14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 GPCPD1Q9NPB8 672 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 FEM1BQ9UK73 627 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 LOC285556D6RIA3 1793 aa14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 NTRK3Q16288 839 aa14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 SLC35G1Q2M3R5 365 aa14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 TMTC3Q6ZXV5 915 aa14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 FAM160B2Q86V87 743 aa14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 SRBD1Q8N5C6 995 aaKnown RBP14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 CHURC1Q8WUH1 139 aa14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 PTPN18Q99952 460 aa14.43□□□□□ -0.1
NIF3L1-201ENST00000359683 BTBD19C9JJ37 291 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 DHX16O60231 1041 aaKnown RBP14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 PLEKHA8P1O95397 391 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 TM4SF4P48230 202 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 KIF23Q02241 960 aaPredicted RBP14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 FUT2Q10981 343 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 CUL4AQ13619 759 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 ANKRD23Q86SG2 305 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 NBPF11Q86T75 865 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 UBA5Q9GZZ9 404 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 RIOX1Q9H6W3 641 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 SLC45A1Q9Y2W3 748 aa14.42□□□□□ -0.1
NIF3L1-201ENST00000359683 CCDC85CA6NKD9 419 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 CYTH3O43739 400 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 IFNAR1P17181 557 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 SLC16A2P36021 539 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 STAT2P52630 851 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 PABPC4Q13310 644 aaKnown RBP eCLIP14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 COG2Q14746 738 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 CCDC83Q8IWF9 413 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 PRPF38AQ8NAV1 312 aaKnown RBP14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 SPZ1Q9BXG8 430 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 TANGO6Q9C0B7 1094 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 MCOLN1Q9GZU1 580 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 CPVLQ9H3G5 476 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 FBXO28Q9NVF7 368 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 CPLX1O14810 134 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 CTDNEP1O95476 244 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 DSG3P32926 999 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 SREBF2Q12772 1141 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 SYDE2Q5VT97 1194 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 CPLX2Q6PUV4 134 aaKnown RBP14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 MYPNQ86TC9 1320 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 CMTR1Q8N1G2 835 aaKnown RBP14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 FAM43AQ8N2R8 423 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 MTMR8Q96EF0 704 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 SLF1Q9BQI6 1058 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 LLPHQ9BRT6 129 aaKnown RBP14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 HOXC10Q9NYD6 342 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 PPP1R9AQ9ULJ8 1098 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 PRR12Q9ULL5 1215 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 ISY1Q9ULR0 285 aaKnown RBP14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 ADAMTS5Q9UNA0 930 aa14.41□□□□□ -0.1
NIF3L1-201ENST00000359683 RLFQ13129 1914 aa14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 PDHXO00330 501 aa14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 FLOT1O75955 427 aa14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 OSBPP22059 807 aa14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 ANP32AP39687 249 aaKnown RBP14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 BECN1Q14457 450 aa14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 ADGRF4Q8IZF3 695 aa14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 P2RX7Q99572 595 aaKnown RBP14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 ASCC2Q9H1I8 757 aaPredicted RBP14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 JMJD4Q9H9V9 463 aa14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 BAZ2BQ9UIF8 2168 aaKnown RBP14.4□□□□□ -0.1
NIF3L1-201ENST00000359683 CNTNAP5Q8WYK1 1306 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 IGF2BP3O00425 579 aaKnown RBP eCLIP14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 CDKL5O76039 1030 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 FDX1P10109 184 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 IKQ13123 557 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 LBX2Q6XYB7 198 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 IFNL1Q8IU54 200 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 CCDC82Q8N4S0 544 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 NSUN7Q8NE18 718 aaKnown RBP14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 KIFC2Q96AC6 838 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 VAT1LQ9HCJ6 419 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 SAGE1Q9NXZ1 904 aa14.39□□□□□ -0.11
NIF3L1-201ENST00000359683 SPDYE16A6NNV3 312 aaPredicted RBP14.38□□□□□ -0.11
NIF3L1-201ENST00000359683 PRPF3O43395 683 aaKnown RBP14.38□□□□□ -0.11
NIF3L1-201ENST00000359683 IRX3P78415 501 aaPredicted RBP14.38□□□□□ -0.11
NIF3L1-201ENST00000359683 OTUD7BQ6GQQ9 843 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms