RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 DNM2P50570 870 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 CTDSPL2Q05D32 466 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 ERCC6LQ2NKX8 1250 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 DCPSQ96C86 337 aaKnown RBP13.5□□□□□ -0.25
DNMT1-202ENST00000359526 ZNF594Q96JF6 807 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-202ENST00000359526 USP28Q96RU2 1077 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 FEZ2Q9UHY8 353 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-202ENST00000359526 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 CDHR2Q9BYE9 1310 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 SEPT6Q14141 434 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 SUPT20HL1Q3ZLR7 823 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 HERC4Q5GLZ8 1057 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-202ENST00000359526 BEND3Q5T5X7 828 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 NLRX1Q86UT6 975 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 GAS2L3Q86XJ1 694 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 ZNF215Q9UL58 517 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-202ENST00000359526 PTH1RQ03431 593 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 EXOC8Q8IYI6 725 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 ARHGAP24Q8N264 748 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 MED4Q9NPJ6 270 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 KCNJ14Q9UNX9 436 aa13.5□□□□□ -0.25
DNMT1-202ENST00000359526 KCNJ18B7U540 433 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 KCNJ12Q14500 433 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 PLS1Q14651 629 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
DNMT1-202ENST00000359526 HYOU1Q9Y4L1 999 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 ARHGEF35A5YM69 484 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 NOL3O60936 208 aaKnown RBP13.49□□□□□ -0.25
DNMT1-202ENST00000359526 DDAH1O94760 285 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 APBA1Q02410 837 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 PEX26Q7Z412 305 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 RPAINQ86UA6 219 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 PNMA8AQ86V59 439 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-202ENST00000359526 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
DNMT1-202ENST00000359526 CTTNBP2NLQ9P2B4 639 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 AGTPBP1Q9UPW5 1226 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 BIRC3Q13489 604 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 ZNF654Q8IZM8 581 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 PPP1R12CQ9BZL4 782 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 LSG1Q9H089 658 aaKnown RBP13.49□□□□□ -0.25
DNMT1-202ENST00000359526 FAM184BQ9ULE4 1060 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 ADCY9O60503 1353 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 PPARAQ07869 468 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 SLC17A8Q8NDX2 589 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 RTEL1Q9NZ71 1219 aa13.49□□□□□ -0.25
DNMT1-202ENST00000359526 A0A0D9SFI3 127 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 SPATA1Q5VX52 437 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 HACE1Q8IYU2 909 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 GOLGA5Q8TBA6 731 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 SAP30BPQ9UHR5 308 aaKnown RBP13.48□□□□□ -0.25
DNMT1-202ENST00000359526 AFF2P51816 1311 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 ZNF521Q96K83 1311 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 TCP1P17987 556 aaKnown RBP13.48□□□□□ -0.25
DNMT1-202ENST00000359526 GCKP35557 465 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 CUL4AQ13619 759 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 MORC3Q14149 939 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 FAM204AQ9H8W3 233 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 MAGEF1Q9HAY2 307 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 SPC25Q9HBM1 224 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 CARMIL3Q8ND23 1372 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 RGL2O15211 777 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-202ENST00000359526 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
DNMT1-202ENST00000359526 CCNA1P78396 465 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 NEDD9Q14511 834 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 TRMT44Q8IYL2 757 aaKnown RBP13.48□□□□□ -0.25
DNMT1-202ENST00000359526 MYL10Q9BUA6 226 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 PCDHA7Q9UN72 937 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 BACH1O14867 736 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 GAS8O95995 478 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 LGSNQ5TDP6 509 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 MYO1AQ9UBC5 1043 aa13.48□□□□□ -0.25
DNMT1-202ENST00000359526 SERPINB2P05120 415 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 ZNF853P0CG23 659 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 KLHL7Q8IXQ5 586 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
DNMT1-202ENST00000359526 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 IWS1Q96ST2 819 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 ZNF804BA4D1E1 1349 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 AP1ARQ63HQ0 302 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 FAM71BQ8TC56 605 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 PPP6R2O75170 966 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 SETSIPP0DME0 302 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 HSPD1P10809 573 aaKnown RBP13.47□□□□□ -0.25
DNMT1-202ENST00000359526 RRAGAQ7L523 313 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 RABGGTAQ92696 567 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 EAF2Q96CJ1 260 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-202ENST00000359526 ASIC3Q9UHC3 531 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 MED23Q9ULK4 1368 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 IKBKBO14920 756 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 NCAPH2Q6IBW4 605 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms