RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 VPS16Q9H269 839 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 FAM153AQ9UHL3 310 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 CAMSAP1Q5T5Y3 1602 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 ESYT3A0FGR9 886 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 CPLX1O14810 134 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 PDHA1P08559 390 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 PCK1P35558 622 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 AMOTQ4VCS5 1084 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 PRCCQ92733 491 aaPredicted RBP12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 BICD1Q96G01 975 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 DNAAF2Q9NVR5 837 aaKnown RBP12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 CCDC38Q502W7 563 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 SPATA1Q5VX52 437 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 IFT20Q8IY31 132 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 CCDC197Q8NCU1 140 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 TET3O43151 1660 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 FECHP22830 423 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 CNGA1P29973 690 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 ALDH3A1P30838 453 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 CARSP49589 748 aaKnown RBP12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 MORC3Q14149 939 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 TTC39AQ5SRH9 613 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 NME9Q86XW9 330 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 RAPGEF5Q92565 580 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 AATFQ9NY61 560 aaKnown RBP eCLIP12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 PLAAQ9Y263 795 aa12.65□□□□□ -0.38
SEPSECS-201ENST00000358971 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 M0R2C6 588 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 FOXO3O43524 673 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 MYZAPP0CAP1 466 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 MAGEA10P43363 369 aaPredicted RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 LMNTD2Q8IXW0 634 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 TEX9Q8N6V9 391 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 RUBCNQ92622 972 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 EAF2Q96CJ1 260 aaPredicted RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 MAF1Q9H063 256 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 SYNRGQ9UMZ2 1314 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 CFAP73A6NFT4 308 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 POLR2DO15514 142 aaKnown RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 MAP3K13O43283 966 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 PPP6R2O75170 966 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 ERCC5P28715 1186 aaPredicted RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 CXCR5P32302 372 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 HERVK_113P62684 666 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 CCDC178Q5BJE1 867 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 HAUS3Q68CZ6 603 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 CREG2Q8IUH2 290 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 CDK19Q9BWU1 502 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 UBE2OQ9C0C9 1292 aaKnown RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 TAF1DQ9H5J8 278 aaPredicted RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 TLR7Q9NYK1 1049 aaKnown RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 SERTAD1Q9UHV2 236 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 STK38LQ9Y2H1 464 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 ANO9A1A5B4 782 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 COBLO75128 1261 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 KRT83P78385 493 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 CNBD1Q8NA66 436 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 EPB41L5Q9HCM4 733 aa12.64□□□□□ -0.39
SEPSECS-201ENST00000358971 PAFAH1B1P43034 410 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 GUCY2DQ02846 1103 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 ZNF268Q14587 947 aaPredicted RBP12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 EFCAB2Q5VUJ9 269 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 SDCCAG8Q86SQ7 713 aaPredicted RBP12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 USHBP1Q8N6Y0 703 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 ZNF274Q96GC6 653 aaPredicted RBP12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 YIPF2Q9BWQ6 316 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 LACRTQ9GZZ8 138 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 ARHGEF10LQ9HCE6 1279 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 PCMTD2Q9NV79 361 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 EHD2Q9NZN4 543 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 DUSP10Q9Y6W6 482 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 MROH2AA6NES4 1674 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 CHGBP05060 677 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 KCNJ2P63252 427 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 ATL2Q8NHH9 583 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 MIPOL1Q8TD10 442 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 CRYBG1Q9Y4K1 1723 aa12.63□□□□□ -0.39
SEPSECS-201ENST00000358971 C5orf60A6NFR6 353 aa12.62□□□□□ -0.39
SEPSECS-201ENST00000358971 TUBP50607 506 aa12.62□□□□□ -0.39
SEPSECS-201ENST00000358971 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
SEPSECS-201ENST00000358971 BEND3Q5T5X7 828 aa12.62□□□□□ -0.39
SEPSECS-201ENST00000358971 CD302Q8IX05 232 aa12.62□□□□□ -0.39
SEPSECS-201ENST00000358971 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
SEPSECS-201ENST00000358971 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
SEPSECS-201ENST00000358971 SNX12Q9UMY4 172 aa12.62□□□□□ -0.39
SEPSECS-201ENST00000358971 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms