RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TTBK2Q6IQ55 1244 aa17.74■□□□□ 0.43
TPM1-206ENST00000358278 FAM160B2Q86V87 743 aa17.74■□□□□ 0.43
TPM1-206ENST00000358278 KIFC2Q96AC6 838 aa17.74■□□□□ 0.43
TPM1-206ENST00000358278 ASCC2Q9H1I8 757 aaPredicted RBP17.74■□□□□ 0.43
TPM1-206ENST00000358278 ZCCHC17Q9NP64 241 aaKnown RBP17.74■□□□□ 0.43
TPM1-206ENST00000358278 LARGE1O95461 756 aa17.73■□□□□ 0.43
TPM1-206ENST00000358278 SLC16A2P36021 539 aa17.73■□□□□ 0.43
TPM1-206ENST00000358278 COG2Q14746 738 aa17.73■□□□□ 0.43
TPM1-206ENST00000358278 SMCR8Q8TEV9 937 aaPredicted RBP17.73■□□□□ 0.43
TPM1-206ENST00000358278 ZSCAN31Q96LW9 406 aaPredicted RBP17.73■□□□□ 0.43
TPM1-206ENST00000358278 PARK7Q99497 189 aaKnown RBP17.73■□□□□ 0.43
TPM1-206ENST00000358278 NCOA5Q9HCD5 579 aaKnown RBP17.73■□□□□ 0.43
TPM1-206ENST00000358278 SMCHD1A6NHR9 2005 aa17.73■□□□□ 0.43
TPM1-206ENST00000358278 PLA2G6O60733 806 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 PFKFB2O60825 505 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 TAF1CQ15572 869 aaPredicted RBP17.72■□□□□ 0.43
TPM1-206ENST00000358278 SYDE2Q5VT97 1194 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 PRPF38AQ8NAV1 312 aaKnown RBP17.72■□□□□ 0.43
TPM1-206ENST00000358278 UBA5Q9GZZ9 404 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 CPVLQ9H3G5 476 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
TPM1-206ENST00000358278 HOXC10Q9NYD6 342 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 PPP1R9AQ9ULJ8 1098 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 CPLX1O14810 134 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 PLEKHA8P1O95397 391 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 ALDH1A1P00352 501 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 CYP2C8P10632 490 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 CDC27P30260 824 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 TMTC3Q6ZXV5 915 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 LZTS2Q9BRK4 669 aa17.72■□□□□ 0.43
TPM1-206ENST00000358278 SPDYE16A6NNV3 312 aaPredicted RBP17.71■□□□□ 0.43
TPM1-206ENST00000358278 ADD1P35611 737 aaKnown RBP17.71■□□□□ 0.43
TPM1-206ENST00000358278 HERVK_113P62684 666 aa17.71■□□□□ 0.43
TPM1-206ENST00000358278 SCRN1Q12765 414 aa17.71■□□□□ 0.43
TPM1-206ENST00000358278 BTNL9Q6UXG8 535 aa17.71■□□□□ 0.43
TPM1-206ENST00000358278 HSCBQ8IWL3 235 aa17.71■□□□□ 0.43
TPM1-206ENST00000358278 CMTR1Q8N1G2 835 aaKnown RBP17.71■□□□□ 0.43
TPM1-206ENST00000358278 CCDC82Q8N4S0 544 aa17.71■□□□□ 0.43
TPM1-206ENST00000358278 NECAB1Q8N987 351 aa17.71■□□□□ 0.43
TPM1-206ENST00000358278 GTF3C6Q969F1 213 aa17.71■□□□□ 0.43
TPM1-206ENST00000358278 P2RX7Q99572 595 aaKnown RBP17.71■□□□□ 0.43
TPM1-206ENST00000358278 PRR12Q9ULL5 1215 aa17.71■□□□□ 0.43
TPM1-206ENST00000358278 CTDP1Q9Y5B0 961 aaPredicted RBP17.71■□□□□ 0.43
TPM1-206ENST00000358278 DSG3P32926 999 aa17.7■□□□□ 0.42
TPM1-206ENST00000358278 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
TPM1-206ENST00000358278 ATG4CQ96DT6 458 aa17.7■□□□□ 0.42
TPM1-206ENST00000358278 VAT1LQ9HCJ6 419 aa17.7■□□□□ 0.42
TPM1-206ENST00000358278 FAM217BQ9NTX9 383 aaPredicted RBP17.7■□□□□ 0.42
TPM1-206ENST00000358278 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 ADGRF4Q8IZF3 695 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 SRBD1Q8N5C6 995 aaKnown RBP17.69■□□□□ 0.42
TPM1-206ENST00000358278 SNX21Q969T3 373 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 TMX3Q96JJ7 454 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 SPZ1Q9BXG8 430 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 RBBP6Q7Z6E9 1792 aaKnown RBP17.69■□□□□ 0.42
TPM1-206ENST00000358278 CNTNAP5Q8WYK1 1306 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 VWA5AO00534 786 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 CCDC83Q8IWF9 413 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 GTF3C2Q8WUA4 911 aaPredicted RBP17.69■□□□□ 0.42
TPM1-206ENST00000358278 ZFYVE28Q9HCC9 887 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 MGAMO43451 1857 aa17.69■□□□□ 0.42
TPM1-206ENST00000358278 CDKL5O76039 1030 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 FDX1P10109 184 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 SMARCA1P28370 1054 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 HOMER1Q86YM7 354 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 DNAJC5GQ8N7S2 189 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 MB21D1Q8N884 522 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 PIBF1Q8WXW3 757 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 PAGR1Q9BTK6 254 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 RIOX1Q9H6W3 641 aa17.68■□□□□ 0.42
TPM1-206ENST00000358278 K7ELQ4 463 aaPredicted RBP17.67■□□□□ 0.42
TPM1-206ENST00000358278 CA12O43570 354 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 CYTH3O43739 400 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 ZBED4O75132 1171 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
TPM1-206ENST00000358278 SNAP25P60880 206 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 MAP2K1Q02750 393 aaPredicted RBP17.67■□□□□ 0.42
TPM1-206ENST00000358278 CRHR2Q13324 411 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 CDC37Q16543 378 aaPredicted RBP17.67■□□□□ 0.42
TPM1-206ENST00000358278 LBX2Q6XYB7 198 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 RRP36Q96EU6 259 aaKnown RBP17.67■□□□□ 0.42
TPM1-206ENST00000358278 BEGAINQ9BUH8 593 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 SLC38A10Q9HBR0 1119 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 SEC63Q9UGP8 760 aaKnown RBP17.67■□□□□ 0.42
TPM1-206ENST00000358278 ADAMTS5Q9UNA0 930 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 IFNAR1P17181 557 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 AKAP17AQ02040 695 aaKnown RBP17.67■□□□□ 0.42
TPM1-206ENST00000358278 SLC35G1Q2M3R5 365 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 CCDC174Q6PII3 467 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 TRIM22Q8IYM9 498 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 PHKBQ93100 1093 aa17.67■□□□□ 0.42
TPM1-206ENST00000358278 RANBP17Q9H2T7 1088 aaKnown RBP17.67■□□□□ 0.42
TPM1-206ENST00000358278 PLXNB2O15031 1838 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 ZNFX1Q9P2E3 1918 aaKnown RBP17.66■□□□□ 0.42
TPM1-206ENST00000358278 PPFIA3O75145 1194 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 TRPA1O75762 1119 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 PLS1Q14651 629 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 NTRK3Q16288 839 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms