RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PCDHGC5Q9Y5F6 944 aa10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 ATXN2Q99700 1313 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-202ENST00000358207 IRS4O14654 1257 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 EZRP15311 586 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 ME3Q16798 604 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 RMI1Q9H9A7 625 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 SPEF2Q9C093 1822 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 SNCBQ16143 134 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 DDX46Q7L014 1031 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 CCDC13Q8IYE1 715 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 GPC2Q8N158 579 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 YIPF3Q9GZM5 350 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 NAT10Q9H0A0 1025 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 A0A1B0GVG6 124 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 SHTN1A0MZ66 631 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 TAF5LO75529 589 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 FMNL1O95466 1100 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 SSBP05455 408 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 HSPA4P34932 840 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 ZBED6P86452 979 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 CAPRIN2Q6IMN6 1127 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 RBM12BQ8IXT5 1001 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 PI4K2BQ8TCG2 481 aa10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 DBNLQ9UJU6 430 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 IQSEC3Q9UPP2 1182 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-202ENST00000358207 AGPSO00116 658 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 MAGEA10P43363 369 aaPredicted RBP10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 PTPN21Q16825 1174 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 DPY19L2Q6NUT2 758 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 BZW1Q7L1Q6 419 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 TMEM139Q8IV31 216 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 PARP9Q8IXQ6 854 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 RASEFQ8IZ41 740 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 SCLT1Q96NL6 688 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 TMX4Q9H1E5 349 aaPredicted RBP10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 RRAGCQ9HB90 399 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 HPCAL4Q9UM19 191 aa10.46□□□□□ -0.73
SMARCAL1-202ENST00000358207 ADORA1P30542 326 aa10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 RFX5P48382 616 aaPredicted RBP10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 GNGT1P63211 74 aa10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 CWF19L1Q69YN2 538 aaKnown RBP10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 KIAA1328Q86T90 577 aa10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 MAGEC3Q8TD91 643 aa10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 FAM227BQ96M60 508 aa10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 TSPAN18Q96SJ8 248 aa10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 ISCA1Q9BUE6 129 aa10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 CAPS2Q9BXY5 557 aa10.46□□□□□ -0.74
SMARCAL1-202ENST00000358207 EPB41L2O43491 1005 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 SMNDC1O75940 238 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 FESP07332 822 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 ITGA6P23229 1130 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 TPP2P29144 1249 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 GGCXP38435 758 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 IARSP41252 1262 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 MFSD4BQ5TF39 518 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 CYB5D1Q6P9G0 228 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 SUPT20HQ8NEM7 779 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 OSBPL3Q9H4L5 887 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 CNNM1Q9NRU3 951 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 SNX14Q9Y5W7 946 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 RAB11FIP3O75154 756 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 KIAA0754O94854 1291 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 MYL1P05976 194 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 LDHAL6AQ6ZMR3 332 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 C3orf67Q6ZVT6 689 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 FAM76AQ8TAV0 307 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 CCDC12Q8WUD4 166 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 TCP11Q8WWU5 503 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 MKL1Q969V6 931 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 SALL3Q9BXA9 1300 aa10.45□□□□□ -0.74
SMARCAL1-202ENST00000358207 RASSF10A6NK89 507 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 TPD52L2O43399 206 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 NRDCO43847 1150 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 SCNN1BP51168 640 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 PPFIA1Q13136 1202 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 IFIT5Q13325 482 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 MTX1Q13505 466 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 FILIP1LQ4L180 1135 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 PNMA8AQ86V59 439 aaPredicted RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 FUKQ8N0W3 1084 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 SCAND2PQ9GZW5 306 aaPredicted RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 TAF1DQ9H5J8 278 aaPredicted RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 VIPAS39Q9H9C1 493 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 ECHDC1Q9NTX5 307 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 MYO6Q9UM54 1294 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 RBM47A0AV96 593 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 ZSCAN12O43309 604 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 SETSIPP0DME0 302 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 TMEM62Q0P6H9 643 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 TNNI3KQ59H18 835 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 LARP1BQ659C4 914 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 CCDC129Q6ZRS4 1044 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 ACRBPQ8NEB7 543 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 RBM17Q96I25 401 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 SEC62Q99442 399 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 FSD1Q9BTV5 496 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 BATF3Q9NR55 127 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms