RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 GABPAQ06546 454 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 KIAA2012Q0VF49 1180 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 IKQ13123 557 aaPredicted RBP20.12■□□□□ 0.81
NPAS3-202ENST00000356141 R3HDM1Q15032 1099 aaKnown RBP20.12■□□□□ 0.81
NPAS3-202ENST00000356141 UBE2SQ16763 222 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 KLHL10Q6JEL2 608 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 CCDC186Q7Z3E2 898 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 RASSF8Q8NHQ8 419 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 TMEM60Q9H2L4 133 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 NOL7Q9UMY1 257 aaKnown RBP20.12■□□□□ 0.81
NPAS3-202ENST00000356141 LRRC37AA6NMS7 1700 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 ATP1A3P13637 1013 aa20.11■□□□□ 0.81
NPAS3-202ENST00000356141 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.11■□□□□ 0.81
NPAS3-202ENST00000356141 SEC63Q9UGP8 760 aaKnown RBP20.11■□□□□ 0.81
NPAS3-202ENST00000356141 KCNA3P22001 575 aa20.11■□□□□ 0.81
NPAS3-202ENST00000356141 DHX8Q14562 1220 aaKnown RBP20.11■□□□□ 0.81
NPAS3-202ENST00000356141 PCDHA6Q9UN73 950 aa20.11■□□□□ 0.81
NPAS3-202ENST00000356141 PCDHA8Q9Y5H6 950 aa20.11■□□□□ 0.81
NPAS3-202ENST00000356141 SMC2O95347 1197 aa20.1■□□□□ 0.81
NPAS3-202ENST00000356141 RRP1BQ14684 758 aaKnown RBP20.1■□□□□ 0.81
NPAS3-202ENST00000356141 HHIPL2Q6UWX4 724 aa20.1■□□□□ 0.81
NPAS3-202ENST00000356141 CSRNP1Q96S65 589 aa20.1■□□□□ 0.81
NPAS3-202ENST00000356141 PCDHA4Q9UN74 947 aa20.1■□□□□ 0.81
NPAS3-202ENST00000356141 ZKSCAN5Q9Y2L8 839 aa20.1■□□□□ 0.81
NPAS3-202ENST00000356141 USP17L10C9JJH3 530 aa20.1■□□□□ 0.81
NPAS3-202ENST00000356141 CERKLQ49MI3 558 aaPredicted RBP20.1■□□□□ 0.81
NPAS3-202ENST00000356141 RRP36Q96EU6 259 aaKnown RBP20.1■□□□□ 0.81
NPAS3-202ENST00000356141 ZDHHC15Q96MV8 337 aa20.1■□□□□ 0.81
NPAS3-202ENST00000356141 SRPRBQ9Y5M8 271 aaKnown RBP20.1■□□□□ 0.81
NPAS3-202ENST00000356141 NRXN2Q9P2S2 1712 aa20.1■□□□□ 0.81
NPAS3-202ENST00000356141 EEF2P13639 858 aaKnown RBP20.09■□□□□ 0.81
NPAS3-202ENST00000356141 BMP6P22004 513 aa20.09■□□□□ 0.81
NPAS3-202ENST00000356141 STX17P56962 302 aa20.09■□□□□ 0.81
NPAS3-202ENST00000356141 CCDC144BQ3MJ40 725 aa20.09■□□□□ 0.81
NPAS3-202ENST00000356141 ZNF75DP51815 510 aa20.09■□□□□ 0.81
NPAS3-202ENST00000356141 CREBRFQ8IUR6 639 aa20.09■□□□□ 0.81
NPAS3-202ENST00000356141 ZFP91Q96JP5 570 aaPredicted RBP20.09■□□□□ 0.81
NPAS3-202ENST00000356141 KCNF1Q9H3M0 494 aa20.09■□□□□ 0.81
NPAS3-202ENST00000356141 PYCARDQ9ULZ3 195 aa20.09■□□□□ 0.81
NPAS3-202ENST00000356141 CCNT1O60563 726 aaKnown RBP20.08■□□□□ 0.81
NPAS3-202ENST00000356141 TTLL1O95922 423 aa20.08■□□□□ 0.81
NPAS3-202ENST00000356141 TCP11L1Q9NUJ3 509 aa20.08■□□□□ 0.81
NPAS3-202ENST00000356141 BARHL2Q9NY43 387 aa20.08■□□□□ 0.81
NPAS3-202ENST00000356141 MAPK8IP1Q9UQF2 711 aa20.08■□□□□ 0.81
NPAS3-202ENST00000356141 KARSQ15046 597 aaKnown RBP20.08■□□□□ 0.8
NPAS3-202ENST00000356141 CEP131Q9UPN4 1083 aa20.08■□□□□ 0.8
NPAS3-202ENST00000356141 BCS1LQ9Y276 419 aa20.08■□□□□ 0.8
NPAS3-202ENST00000356141 GH2P01242 217 aa20.08■□□□□ 0.8
NPAS3-202ENST00000356141 POSTNQ15063 836 aa20.08■□□□□ 0.8
NPAS3-202ENST00000356141 EGFRP00533 1210 aa20.07■□□□□ 0.8
NPAS3-202ENST00000356141 CLCN1P35523 988 aa20.07■□□□□ 0.8
NPAS3-202ENST00000356141 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
NPAS3-202ENST00000356141 SOGA3Q5TF21 947 aa20.07■□□□□ 0.8
NPAS3-202ENST00000356141 ADGRF4Q8IZF3 695 aa20.07■□□□□ 0.8
NPAS3-202ENST00000356141 TMEM39BQ9GZU3 492 aa20.07■□□□□ 0.8
NPAS3-202ENST00000356141 USH1GQ495M9 461 aa20.07■□□□□ 0.8
NPAS3-202ENST00000356141 GNAQP50148 359 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 NLRP12P59046 1061 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 GOLGA8FQ08AF8 430 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 GOLGA8DPQ0D2H9 430 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 ANKS1AQ92625 1134 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 FZD1Q9UP38 647 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 PPP1R11O60927 126 aaPredicted RBP20.06■□□□□ 0.8
NPAS3-202ENST00000356141 TNNI2P48788 182 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 DNTTIP2Q5QJE6 756 aaKnown RBP20.06■□□□□ 0.8
NPAS3-202ENST00000356141 IFNKQ9P0W0 207 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 COL4A5P29400 1685 aa20.06■□□□□ 0.8
NPAS3-202ENST00000356141 ECE1P42892 770 aa20.05■□□□□ 0.8
NPAS3-202ENST00000356141 NBPF9Q3BBW0 867 aa20.05■□□□□ 0.8
NPAS3-202ENST00000356141 EEF2KMTQ96G04 330 aa20.05■□□□□ 0.8
NPAS3-202ENST00000356141 MAN1B1Q9UKM7 699 aa20.05■□□□□ 0.8
NPAS3-202ENST00000356141 SUGT1Q9Y2Z0 365 aa20.05■□□□□ 0.8
NPAS3-202ENST00000356141 ACTN4O43707 911 aaKnown RBP20.04■□□□□ 0.8
NPAS3-202ENST00000356141 SLC1A4P43007 532 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 CERS3Q8IU89 383 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 TBCKQ8TEA7 893 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 JMJD4Q9H9V9 463 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 PI4KBQ9UBF8 816 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 CALML3P27482 149 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 ICA1Q05084 483 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 DLGAP5Q15398 846 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 DLEC1Q9Y238 1755 aa20.04■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L15C9J2P7 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L13C9JLJ4 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L11C9JVI0 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L18D6R9N7 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L22D6RA61 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L17D6RBQ6 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L19D6RCP7 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L20D6RJB6 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 RASSF7Q02833 373 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 FMR1Q06787 632 aaKnown RBP eCLIP20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L24Q0WX57 530 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 DGKZQ13574 1117 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 PRAMEF18Q5VWM3 479 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 USP17L6PQ6QN14 398 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 NAT10Q9H0A0 1025 aaKnown RBP20.03■□□□□ 0.8
NPAS3-202ENST00000356141 GJA3Q9Y6H8 435 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 ASTN2O75129 1339 aaPredicted RBP20.03■□□□□ 0.8
NPAS3-202ENST00000356141 OGFOD1Q8N543 542 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms