RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 ACTN3Q08043 901 aaPredicted RBP21.12■□□□□ 0.97
PRPF39-201ENST00000355765 KRT26Q7Z3Y9 468 aa21.12■□□□□ 0.97
PRPF39-201ENST00000355765 IPO7O95373 1038 aaKnown RBP21.12■□□□□ 0.97
PRPF39-201ENST00000355765 NAA35Q5VZE5 725 aa21.12■□□□□ 0.97
PRPF39-201ENST00000355765 NHEJ1Q9H9Q4 299 aaPredicted RBP21.12■□□□□ 0.97
PRPF39-201ENST00000355765 NLRP2Q9NX02 1062 aa21.12■□□□□ 0.97
PRPF39-201ENST00000355765 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 EPB41L4AQ9HCS5 686 aaPredicted RBP21.11■□□□□ 0.97
PRPF39-201ENST00000355765 LRWD1Q9UFC0 647 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 LSP1P33241 339 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 CYLC1P35663 651 aaPredicted RBP21.11■□□□□ 0.97
PRPF39-201ENST00000355765 PMS1P54277 932 aaKnown RBP21.11■□□□□ 0.97
PRPF39-201ENST00000355765 WTAPQ15007 396 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 NFRKBQ6P4R8 1299 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 SPATA4Q8NEY3 305 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 NAPBQ9H115 298 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 MLXIPQ9HAP2 919 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 CAPN11Q9UMQ6 739 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 CAPN6Q9Y6Q1 641 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 NAP1L1P55209 391 aaKnown RBP21.11■□□□□ 0.97
PRPF39-201ENST00000355765 MMGT1Q8N4V1 131 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 SNX12Q9UMY4 172 aa21.11■□□□□ 0.97
PRPF39-201ENST00000355765 B4DLN1 442 aa21.1■□□□□ 0.97
PRPF39-201ENST00000355765 EPHB4P54760 987 aa21.1■□□□□ 0.97
PRPF39-201ENST00000355765 CCDC96Q2M329 555 aa21.1■□□□□ 0.97
PRPF39-201ENST00000355765 LGALS16A8MUM7 142 aa21.1■□□□□ 0.97
PRPF39-201ENST00000355765 ECM2O94769 699 aaPredicted RBP21.1■□□□□ 0.97
PRPF39-201ENST00000355765 PDE6AP16499 860 aa21.1■□□□□ 0.97
PRPF39-201ENST00000355765 TRIM21P19474 475 aaKnown RBP21.1■□□□□ 0.97
PRPF39-201ENST00000355765 IFT88Q13099 833 aa21.1■□□□□ 0.97
PRPF39-201ENST00000355765 PCMTD1Q96MG8 357 aaPredicted RBP21.1■□□□□ 0.97
PRPF39-201ENST00000355765 BCL9LQ86UU0 1499 aa21.1■□□□□ 0.97
PRPF39-201ENST00000355765 ANO9A1A5B4 782 aa21.09■□□□□ 0.97
PRPF39-201ENST00000355765 HDLBPQ00341 1268 aaKnown RBP21.09■□□□□ 0.97
PRPF39-201ENST00000355765 ZNF473Q8WTR7 871 aaKnown RBP21.09■□□□□ 0.97
PRPF39-201ENST00000355765 N4BP2L2Q92802 583 aaPredicted RBP21.09■□□□□ 0.97
PRPF39-201ENST00000355765 CCDC43Q96MW1 224 aaKnown RBP21.09■□□□□ 0.97
PRPF39-201ENST00000355765 KLC4Q9NSK0 619 aa21.09■□□□□ 0.97
PRPF39-201ENST00000355765 KIF1CO43896 1103 aaKnown RBP21.09■□□□□ 0.97
PRPF39-201ENST00000355765 MOCS3O95396 460 aa21.09■□□□□ 0.97
PRPF39-201ENST00000355765 SSBP05455 408 aaKnown RBP eCLIP21.09■□□□□ 0.97
PRPF39-201ENST00000355765 DDR1Q08345 913 aa21.09■□□□□ 0.97
PRPF39-201ENST00000355765 KIF5AQ12840 1032 aa21.09■□□□□ 0.97
PRPF39-201ENST00000355765 PTGDRQ13258 359 aa21.09■□□□□ 0.97
PRPF39-201ENST00000355765 HAUS3Q68CZ6 603 aa21.09■□□□□ 0.97
PRPF39-201ENST00000355765 ESYT3A0FGR9 886 aa21.08■□□□□ 0.97
PRPF39-201ENST00000355765 CHUKO15111 745 aa21.08■□□□□ 0.97
PRPF39-201ENST00000355765 NCK2O43639 380 aa21.08■□□□□ 0.97
PRPF39-201ENST00000355765 PLEKP08567 350 aaPredicted RBP21.08■□□□□ 0.97
PRPF39-201ENST00000355765 EPB41P11171 864 aaKnown RBP21.08■□□□□ 0.97
PRPF39-201ENST00000355765 ZC3H6P61129 1189 aaKnown RBP21.08■□□□□ 0.97
PRPF39-201ENST00000355765 SF3B2Q13435 895 aaKnown RBP21.08■□□□□ 0.97
PRPF39-201ENST00000355765 METTL24Q5JXM2 366 aa21.08■□□□□ 0.97
PRPF39-201ENST00000355765 DDX17Q92841 729 aaKnown RBP21.08■□□□□ 0.97
PRPF39-201ENST00000355765 STRBPQ96SI9 672 aaKnown RBP21.08■□□□□ 0.97
PRPF39-201ENST00000355765 ZNHIT6Q9NWK9 470 aaKnown RBP21.08■□□□□ 0.97
PRPF39-201ENST00000355765 STIM2Q9P246 746 aa21.08■□□□□ 0.97
PRPF39-201ENST00000355765 ZNF330Q9Y3S2 320 aaPredicted RBP21.08■□□□□ 0.97
PRPF39-201ENST00000355765 LAMB4A4D0S4 1761 aa21.08■□□□□ 0.97
PRPF39-201ENST00000355765 ZNF658Q5TYW1 1059 aaPredicted RBP21.08■□□□□ 0.96
PRPF39-201ENST00000355765 IFNL3Q8IZI9 196 aa21.08■□□□□ 0.96
PRPF39-201ENST00000355765 MYH7P12883 1935 aa21.08■□□□□ 0.96
PRPF39-201ENST00000355765 SLIT3O75094 1523 aa21.08■□□□□ 0.96
PRPF39-201ENST00000355765 ZSCAN5CA6NGD5 496 aaPredicted RBP21.07■□□□□ 0.96
PRPF39-201ENST00000355765 ZNF263O14978 683 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 RPN1P04843 607 aaKnown RBP21.07■□□□□ 0.96
PRPF39-201ENST00000355765 ELF1P32519 619 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 NEDD9Q14511 834 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 CCDC181Q5TID7 509 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 ALS2CLQ60I27 953 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 MFSD6Q6ZSS7 791 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 CCDC13Q8IYE1 715 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 FANCBQ8NB91 859 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 EPN3Q9H201 632 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 PRKAB2O43741 272 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 FAM153BP0C7A2 387 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 KRT2P35908 639 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 FAM153CQ494X1 144 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 CCDC40Q4G0X9 1142 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 PDXDC2PQ6P474 469 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 ZNF507Q8TCN5 953 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 FERMT2Q96AC1 680 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 ARMT1Q9H993 441 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 A1CFQ9NQ94 594 aaKnown RBP21.07■□□□□ 0.96
PRPF39-201ENST00000355765 FAM153AQ9UHL3 310 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 MCM8Q9UJA3 840 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 TMEM94Q12767 1356 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 MYH10P35580 1976 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 GTPBP6O43824 516 aaPredicted RBP21.07■□□□□ 0.96
PRPF39-201ENST00000355765 MBD4O95243 580 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 AKNAD1Q5T1N1 836 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 ZNF654Q8IZM8 581 aa21.07■□□□□ 0.96
PRPF39-201ENST00000355765 KDM4FA0A1W2PPD8 638 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 ZNF233A6NK53 670 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 GUCY2FP51841 1108 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 MEA1Q16626 185 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 EMBQ6PCB8 327 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 MICALCLQ6ZW33 695 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 CEP57Q86XR8 500 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 FNBP4Q8N3X1 1017 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms