RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 JAG1P78504 1218 aa26.17■■□□□ 1.78
SCAMP3-202ENST00000355379 CCDC96Q2M329 555 aa26.17■■□□□ 1.78
SCAMP3-202ENST00000355379 MTMR8Q96EF0 704 aa26.17■■□□□ 1.78
SCAMP3-202ENST00000355379 VAT1LQ9HCJ6 419 aa26.17■■□□□ 1.78
SCAMP3-202ENST00000355379 LMNB1P20700 586 aa26.16■■□□□ 1.78
SCAMP3-202ENST00000355379 NAPAP54920 295 aa26.16■■□□□ 1.78
SCAMP3-202ENST00000355379 RESP18Q5W5W9 173 aa26.16■■□□□ 1.78
SCAMP3-202ENST00000355379 HOMER1Q86YM7 354 aa26.16■■□□□ 1.78
SCAMP3-202ENST00000355379 ZNF579Q8NAF0 562 aaKnown RBP26.16■■□□□ 1.78
SCAMP3-202ENST00000355379 GMCL1Q96IK5 515 aa26.16■■□□□ 1.78
SCAMP3-202ENST00000355379 JMJD4Q9H9V9 463 aa26.16■■□□□ 1.78
SCAMP3-202ENST00000355379 C6orf50Q9HD87 102 aa26.16■■□□□ 1.78
SCAMP3-202ENST00000355379 ZNF541Q9H0D2 1346 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 PNMA6FA0A0J9YX94 578 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 A0A1B0GVL5 298 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 GNA11P29992 359 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 NDUFA8P51970 172 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 CAMK4Q16566 473 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 TTC38Q5R3I4 469 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 PPP1R18Q6NYC8 613 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 ARHGAP27Q6ZUM4 889 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 ADGRF4Q8IZF3 695 aa26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 FHDC1Q9C0D6 1143 aaPredicted RBP26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 FBXO2Q9UK22 296 aaPredicted RBP26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 SRPRBQ9Y5M8 271 aaKnown RBP26.15■■□□□ 1.78
SCAMP3-202ENST00000355379 CCDC192P0DO97 292 aa26.14■■□□□ 1.78
SCAMP3-202ENST00000355379 SHC4Q6S5L8 630 aa26.14■■□□□ 1.78
SCAMP3-202ENST00000355379 PIK3AP1Q6ZUJ8 805 aa26.14■■□□□ 1.78
SCAMP3-202ENST00000355379 PCDHA6Q9UN73 950 aa26.14■■□□□ 1.78
SCAMP3-202ENST00000355379 HPSEQ9Y251 543 aa26.14■■□□□ 1.78
SCAMP3-202ENST00000355379 PCDHA8Q9Y5H6 950 aa26.14■■□□□ 1.78
SCAMP3-202ENST00000355379 ATAD5Q96QE3 1844 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 F5H6K3 240 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 SLC1A4P43007 532 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 KLRC3Q07444 240 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 RASA3Q14644 834 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 TTBK2Q6IQ55 1244 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 TIGD1Q96MW7 591 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 ARHGEF10LQ9HCE6 1279 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 ZBTB21Q9ULJ3 1066 aa26.14■■□□□ 1.77
SCAMP3-202ENST00000355379 SMCO2A6NFE2 343 aa26.13■■□□□ 1.77
SCAMP3-202ENST00000355379 ADAMTS3O15072 1205 aa26.13■■□□□ 1.77
SCAMP3-202ENST00000355379 PFKFB1P16118 471 aa26.13■■□□□ 1.77
SCAMP3-202ENST00000355379 NOM1Q5C9Z4 860 aaKnown RBP26.13■■□□□ 1.77
SCAMP3-202ENST00000355379 KCTD1Q719H9 257 aa26.13■■□□□ 1.77
SCAMP3-202ENST00000355379 H7C1D1 291 aa26.12■■□□□ 1.77
SCAMP3-202ENST00000355379 EGFRP00533 1210 aa26.12■■□□□ 1.77
SCAMP3-202ENST00000355379 ATP2B1P20020 1258 aa26.12■■□□□ 1.77
SCAMP3-202ENST00000355379 KIF4BQ2VIQ3 1234 aa26.12■■□□□ 1.77
SCAMP3-202ENST00000355379 CCDC194A0A1B0GVG4 234 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 CAP2P40123 477 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 SAMD7Q7Z3H4 446 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 KRT25Q7Z3Z0 450 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 CDAN1Q8IWY9 1227 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 FERMT2Q96AC1 680 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 TEPSINQ96N21 525 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 CLIC6Q96NY7 704 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 TMX2Q9Y320 296 aa26.11■■□□□ 1.77
SCAMP3-202ENST00000355379 ZBTB5O15062 677 aa26.1■■□□□ 1.77
SCAMP3-202ENST00000355379 ZNF202O95125 648 aa26.1■■□□□ 1.77
SCAMP3-202ENST00000355379 NDUFB10O96000 172 aa26.1■■□□□ 1.77
SCAMP3-202ENST00000355379 TBC1D10BQ4KMP7 808 aaPredicted RBP26.1■■□□□ 1.77
SCAMP3-202ENST00000355379 GPC2Q8N158 579 aa26.1■■□□□ 1.77
SCAMP3-202ENST00000355379 GINM1Q9NU53 330 aa26.1■■□□□ 1.77
SCAMP3-202ENST00000355379 A0A1W2PRG0 241 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 SYKP43405 635 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 ATP2C1P98194 919 aaPredicted RBP26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 UVSSAQ2YD98 709 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 CKAP2LQ8IYA6 745 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 PANK2Q9BZ23 570 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 HACL1Q9UJ83 578 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 USP17L10C9JJH3 530 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 SLC16A2P36021 539 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 TYRO3Q06418 890 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 ZNF174Q15697 407 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 SASS6Q6UVJ0 657 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 BTNL9Q6UXG8 535 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 MIGA2Q7L4E1 593 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 FAM13BQ9NYF5 915 aa26.09■■□□□ 1.77
SCAMP3-202ENST00000355379 WNT7AO00755 349 aa26.08■■□□□ 1.77
SCAMP3-202ENST00000355379 BMP3P12645 472 aa26.08■■□□□ 1.77
SCAMP3-202ENST00000355379 RASGRP4Q8TDF6 673 aa26.08■■□□□ 1.77
SCAMP3-202ENST00000355379 SH2D4AQ9H788 454 aa26.08■■□□□ 1.77
SCAMP3-202ENST00000355379 GOPCQ9HD26 462 aa26.08■■□□□ 1.77
SCAMP3-202ENST00000355379 GPRC5DQ9NZD1 345 aa26.08■■□□□ 1.77
SCAMP3-202ENST00000355379 ASNSP08243 561 aa26.07■■□□□ 1.76
SCAMP3-202ENST00000355379 APOBEC3FQ8IUX4 373 aaKnown RBP26.07■■□□□ 1.76
SCAMP3-202ENST00000355379 ELOA2Q8IYF1 753 aaPredicted RBP26.07■■□□□ 1.76
SCAMP3-202ENST00000355379 COA7Q96BR5 231 aa26.07■■□□□ 1.76
SCAMP3-202ENST00000355379 SDF4Q9BRK5 362 aa26.07■■□□□ 1.76
SCAMP3-202ENST00000355379 SYT17Q9BSW7 474 aa26.07■■□□□ 1.76
SCAMP3-202ENST00000355379 PHF20L1A8MW92 1017 aa26.06■■□□□ 1.76
SCAMP3-202ENST00000355379 RAD21O60216 631 aa26.06■■□□□ 1.76
SCAMP3-202ENST00000355379 ADCY7P51828 1080 aa26.06■■□□□ 1.76
SCAMP3-202ENST00000355379 PTGDRQ13258 359 aa26.06■■□□□ 1.76
SCAMP3-202ENST00000355379 RIC8AQ9NPQ8 531 aa26.06■■□□□ 1.76
SCAMP3-202ENST00000355379 KCNH3Q9ULD8 1083 aa26.06■■□□□ 1.76
SCAMP3-202ENST00000355379 MRVI1Q9Y6F6 885 aa26.06■■□□□ 1.76
SCAMP3-202ENST00000355379 PPP1R11O60927 126 aaPredicted RBP26.05■■□□□ 1.76
SCAMP3-202ENST00000355379 NONOQ15233 471 aaKnown RBP eCLIP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms