RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ARMCX5Q6P1M9 558 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 ELOA2Q8IYF1 753 aaPredicted RBP12.17□□□□□ -0.46
SND1-201ENST00000354725 CNBD1Q8NA66 436 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 NCOA5Q9HCD5 579 aaKnown RBP12.17□□□□□ -0.46
SND1-201ENST00000354725 ORC3Q9UBD5 711 aaPredicted RBP12.17□□□□□ -0.46
SND1-201ENST00000354725 EYA2O00167 538 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 TPTE2Q6XPS3 522 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 BRAPQ7Z569 592 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 LRRN4CLQ8ND94 238 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 FAM89AQ96GI7 184 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 KIF9Q9HAQ2 790 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 FBXO9Q9UK97 447 aaPredicted RBP12.17□□□□□ -0.46
SND1-201ENST00000354725 ODF2LQ9ULJ1 636 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 IKBKBO14920 756 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 CCDC175P0C221 793 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 GCKP35557 465 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 LIG3P49916 1009 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 PREPLQ4J6C6 727 aaPredicted RBP12.17□□□□□ -0.46
SND1-201ENST00000354725 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 MMTAG2Q9BU76 263 aaKnown RBP12.17□□□□□ -0.46
SND1-201ENST00000354725 LMCD1Q9NZU5 365 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 MROH7-TTC4A0A0A0MT08 1334 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 PYGLP06737 847 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 PRPHP41219 470 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 HHATQ5VTY9 493 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 CEP57L1Q8IYX8 460 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 ZNF512BQ96KM6 892 aaPredicted RBP12.16□□□□□ -0.46
SND1-201ENST00000354725 MYH2Q9UKX2 1941 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 CDKL5O76039 1030 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 TUBB4AP04350 444 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 DPCR1Q3MIW9 517 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 STYK1Q6J9G0 422 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 TAX1BP1Q86VP1 789 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 TMEM165Q9HC07 324 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 CLIC4Q9Y696 253 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 COL4A5P29400 1685 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 MYH6P13533 1939 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 H3BQF6 201 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 CSPG5O95196 566 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 IMPDH2P12268 514 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 RDXP35241 583 aaKnown RBP12.16□□□□□ -0.46
SND1-201ENST00000354725 CCDC73Q6ZRK6 1079 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 SLC51AQ86UW1 340 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 OGFOD1Q8N543 542 aa12.16□□□□□ -0.46
SND1-201ENST00000354725 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
SND1-201ENST00000354725 KIAA1522Q9P206 1035 aaPredicted RBP12.16□□□□□ -0.46
SND1-201ENST00000354725 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.16□□□□□ -0.46
SND1-201ENST00000354725 KIF28PB7ZC32 967 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 GOLGA6L19H0YKK7 550 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 CMA1P23946 247 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 DHX8Q14562 1220 aaKnown RBP12.15□□□□□ -0.46
SND1-201ENST00000354725 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 AOPEPQ8N6M6 819 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 C3orf20Q8ND61 904 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 ZMYM6O95789 1325 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 DPEP1P16444 411 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 RAB27AP51159 221 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 NLRP12P59046 1061 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 KIF23Q02241 960 aaPredicted RBP12.15□□□□□ -0.46
SND1-201ENST00000354725 PTPAQ15257 358 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 ZCCHC8Q6NZY4 707 aaKnown RBP12.15□□□□□ -0.46
SND1-201ENST00000354725 ZKSCAN4Q969J2 545 aaPredicted RBP12.15□□□□□ -0.46
SND1-201ENST00000354725 MAP3K14Q99558 947 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 SLX1AQ9BQ83 275 aa12.15□□□□□ -0.46
SND1-201ENST00000354725 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
SND1-201ENST00000354725 TIMM10P62072 90 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 MYLK4Q86YV6 388 aaPredicted RBP12.14□□□□□ -0.47
SND1-201ENST00000354725 DRC7Q8IY82 874 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 TTLL11Q8NHH1 800 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 ZBTB10Q96DT7 871 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
SND1-201ENST00000354725 IRF2BPLQ9H1B7 796 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 TRMT112Q9UI30 125 aaKnown RBP12.14□□□□□ -0.47
SND1-201ENST00000354725 A0A087WWV3 80 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 A0A1B0GUA9 196 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 FANCGO15287 622 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 CCDC150Q8NCX0 1101 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 UBXN4Q92575 508 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 PPP1R13BQ96KQ4 1090 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
SND1-201ENST00000354725 CHRNA5P30532 468 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 TMEM139Q8IV31 216 aa12.14□□□□□ -0.47
SND1-201ENST00000354725 IRS2Q9Y4H2 1338 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 CHUKO15111 745 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 MYO1BO43795 1136 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 PDE8AO60658 829 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 PPP6R2O75170 966 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 PDIA5Q14554 519 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 ENOX1Q8TC92 643 aaKnown RBP12.13□□□□□ -0.47
SND1-201ENST00000354725 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
SND1-201ENST00000354725 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
SND1-201ENST00000354725 VPS18Q9P253 973 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.13□□□□□ -0.475e-15■□□□□ 10.9
SND1-201ENST00000354725 CTSWP56202 376 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms