RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PCDHA4Q9UN74 947 aa22.07■■□□□ 1.12
COL13A1-201ENST00000354547 ERVK-24P63145 666 aa22.07■■□□□ 1.12
COL13A1-201ENST00000354547 TCP11X2Q5H9J9 407 aa22.07■■□□□ 1.12
COL13A1-201ENST00000354547 SLC10A5Q5PT55 438 aa22.07■■□□□ 1.12
COL13A1-201ENST00000354547 C12orf60Q5U649 245 aa22.07■■□□□ 1.12
COL13A1-201ENST00000354547 ZNF444Q8N0Y2 327 aaPredicted RBP22.07■■□□□ 1.12
COL13A1-201ENST00000354547 NYXQ9GZU5 481 aa22.07■■□□□ 1.12
COL13A1-201ENST00000354547 KIF20AO95235 890 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 UBA7P41226 1012 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 TRAPPC10P48553 1259 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 WWC2Q6AWC2 1192 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 ANKRD20A12PQ8NF67 263 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 RWDD2AQ9UIY3 292 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 KRT9P35527 623 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 PMS1P54277 932 aaKnown RBP22.06■■□□□ 1.12
COL13A1-201ENST00000354547 NFIXQ14938 502 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 SLC35G1Q2M3R5 365 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 ZNF658Q5TYW1 1059 aaPredicted RBP22.06■■□□□ 1.12
COL13A1-201ENST00000354547 SLC35F6Q8N357 371 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 C4orf32Q8N8J7 132 aa22.06■■□□□ 1.12
COL13A1-201ENST00000354547 ZRANB2O95218 330 aaKnown RBP eCLIP22.06■■□□□ 1.12
COL13A1-201ENST00000354547 ZCCHC17Q9NP64 241 aaKnown RBP22.06■■□□□ 1.12
COL13A1-201ENST00000354547 CYTH3O43739 400 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 SBK1Q52WX2 424 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 ABHD10Q9NUJ1 306 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 NARFQ9UHQ1 456 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 MAD2L2Q9UI95 211 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 SASH3O75995 380 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 CT47A1Q5JQC4 288 aaPredicted RBP22.05■■□□□ 1.12
COL13A1-201ENST00000354547 GOLGA1Q92805 767 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 CHP1Q99653 195 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 NAA15Q9BXJ9 866 aaKnown RBP22.05■■□□□ 1.12
COL13A1-201ENST00000354547 DISC1Q9NRI5 854 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 MYH8P13535 1937 aa22.05■■□□□ 1.12
COL13A1-201ENST00000354547 A0A1B0GUL6 1792 aa22.04■■□□□ 1.12
COL13A1-201ENST00000354547 LONP1P36776 959 aaKnown RBP22.04■■□□□ 1.12
COL13A1-201ENST00000354547 GPR161Q8N6U8 529 aaKnown RBP22.04■■□□□ 1.12
COL13A1-201ENST00000354547 PCDHA6Q9UN73 950 aa22.04■■□□□ 1.12
COL13A1-201ENST00000354547 TFR2Q9UP52 801 aa22.04■■□□□ 1.12
COL13A1-201ENST00000354547 PCDHA8Q9Y5H6 950 aa22.04■■□□□ 1.12
COL13A1-201ENST00000354547 CHMP4BP1P59074 171 aa22.04■■□□□ 1.12
COL13A1-201ENST00000354547 CC2D1AQ6P1N0 951 aaPredicted RBP22.04■■□□□ 1.12
COL13A1-201ENST00000354547 LIMA1Q9UHB6 759 aaKnown RBP22.04■■□□□ 1.12
COL13A1-201ENST00000354547 SPTY2D1Q68D10 685 aaPredicted RBP22.04■■□□□ 1.12
COL13A1-201ENST00000354547 LETM2Q2VYF4 491 aa22.03■■□□□ 1.12
COL13A1-201ENST00000354547 NAALADL2Q58DX5 795 aa22.03■■□□□ 1.12
COL13A1-201ENST00000354547 RSRC2Q7L4I2 434 aaKnown RBP22.03■■□□□ 1.12
COL13A1-201ENST00000354547 RMND1Q9NWS8 449 aa22.03■■□□□ 1.12
COL13A1-201ENST00000354547 TRIM10Q9UDY6 481 aa22.03■■□□□ 1.12
COL13A1-201ENST00000354547 PARP1P09874 1014 aaKnown RBP22.03■■□□□ 1.12
COL13A1-201ENST00000354547 TRIM47Q96LD4 638 aa22.03■■□□□ 1.12
COL13A1-201ENST00000354547 C8orf37Q96NL8 207 aa22.03■■□□□ 1.12
COL13A1-201ENST00000354547 TM4SF1P30408 202 aa22.02■■□□□ 1.12
COL13A1-201ENST00000354547 ARL6IP4Q66PJ3 421 aaKnown RBP22.02■■□□□ 1.12
COL13A1-201ENST00000354547 DGKHQ86XP1 1220 aa22.02■■□□□ 1.12
COL13A1-201ENST00000354547 AMOTL1Q8IY63 956 aa22.02■■□□□ 1.12
COL13A1-201ENST00000354547 ARHGEF1Q92888 912 aaKnown RBP22.02■■□□□ 1.12
COL13A1-201ENST00000354547 TMEM47Q9BQJ4 181 aa22.02■■□□□ 1.12
COL13A1-201ENST00000354547 TBC1D8O95759 1140 aa22.02■■□□□ 1.12
COL13A1-201ENST00000354547 ARFGAP3Q9NP61 516 aa22.02■■□□□ 1.12
COL13A1-201ENST00000354547 GUCA1BQ9UMX6 200 aa22.02■■□□□ 1.12
COL13A1-201ENST00000354547 IRF2BP1Q8IU81 584 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 RTCBQ9Y3I0 505 aaKnown RBP22.01■■□□□ 1.11
COL13A1-201ENST00000354547 CTAGE9A4FU28 777 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 KLRF2D3W0D1 207 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 RHOXF2BP0C7M4 288 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 USP17L2Q6R6M4 530 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 TMTC1Q8IUR5 882 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 LRRC15Q8TF66 581 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 RHOXF2Q9BQY4 288 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 CCNT1O60563 726 aaKnown RBP22.01■■□□□ 1.11
COL13A1-201ENST00000354547 RPS6KA4O75676 772 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 NAPAP54920 295 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 SPAG1Q07617 926 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 GRM4Q14833 912 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 RABGGTAQ92696 567 aa22.01■■□□□ 1.11
COL13A1-201ENST00000354547 CCNL1Q9UK58 526 aaPredicted RBP22.01■■□□□ 1.11
COL13A1-201ENST00000354547 LAMB2P55268 1798 aa22■■□□□ 1.11
COL13A1-201ENST00000354547 SCN7AQ01118 1682 aa22■■□□□ 1.11
COL13A1-201ENST00000354547 TTC26A0AVF1 554 aa22■■□□□ 1.11
COL13A1-201ENST00000354547 CYP26C1Q6V0L0 522 aa22■■□□□ 1.11
COL13A1-201ENST00000354547 BARGINQ6ZT62 677 aa22■■□□□ 1.11
COL13A1-201ENST00000354547 PYM1Q9BRP8 204 aaKnown RBP22■■□□□ 1.11
COL13A1-201ENST00000354547 CCDC178Q5BJE1 867 aa22■■□□□ 1.11
COL13A1-201ENST00000354547 SRGAP1Q7Z6B7 1085 aa22■■□□□ 1.11
COL13A1-201ENST00000354547 MKRN1Q9UHC7 482 aaKnown RBP22■■□□□ 1.11
COL13A1-201ENST00000354547 CDC23Q9UJX2 597 aa22■■□□□ 1.11
COL13A1-201ENST00000354547 STXBP3O00186 592 aa21.99■■□□□ 1.11
COL13A1-201ENST00000354547 BAG3O95817 575 aa21.99■■□□□ 1.11
COL13A1-201ENST00000354547 GPIHBP1Q8IV16 184 aa21.99■■□□□ 1.11
COL13A1-201ENST00000354547 ADSSL1Q8N142 457 aa21.99■■□□□ 1.11
COL13A1-201ENST00000354547 HPS3Q969F9 1004 aa21.99■■□□□ 1.11
COL13A1-201ENST00000354547 NGLY1Q96IV0 654 aa21.99■■□□□ 1.11
COL13A1-201ENST00000354547 WNK3Q9BYP7 1800 aa21.99■■□□□ 1.11
COL13A1-201ENST00000354547 LRRC10BA6NIK2 292 aa21.99■■□□□ 1.11
COL13A1-201ENST00000354547 RNF216Q9NWF9 866 aaPredicted RBP21.99■■□□□ 1.11
COL13A1-201ENST00000354547 GYS2P54840 703 aa21.98■■□□□ 1.11
COL13A1-201ENST00000354547 WDR66Q8TBY9 1149 aa21.98■■□□□ 1.11
COL13A1-201ENST00000354547 PCMTD1Q96MG8 357 aaPredicted RBP21.98■■□□□ 1.11
COL13A1-201ENST00000354547 UBA5Q9GZZ9 404 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms