RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 COPB2P35606 906 aa13.6□□□□□ -0.23
CDRT1-202ENST00000354433 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
CDRT1-202ENST00000354433 MCMDC2Q4G0Z9 681 aa13.6□□□□□ -0.23
CDRT1-202ENST00000354433 SNRNP48Q6IEG0 339 aaKnown RBP13.6□□□□□ -0.23
CDRT1-202ENST00000354433 RIOX2Q8IUF8 465 aa13.6□□□□□ -0.23
CDRT1-202ENST00000354433 CPXCR1Q8N123 301 aa13.6□□□□□ -0.23
CDRT1-202ENST00000354433 NEDD1Q8NHV4 660 aa13.6□□□□□ -0.23
CDRT1-202ENST00000354433 TEX13BQ9BXU2 312 aa13.6□□□□□ -0.23
CDRT1-202ENST00000354433 FOXP2O15409 715 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 COBLO75128 1261 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
CDRT1-202ENST00000354433 CHMLP26374 656 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 RRP12Q5JTH9 1297 aaKnown RBP13.59□□□□□ -0.23
CDRT1-202ENST00000354433 PPP4R3BQ5MIZ7 849 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 OLFML2BQ68BL8 750 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 SLFN13Q68D06 897 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 ABRAQ8N0Z2 381 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 PRPF38AQ8NAV1 312 aaKnown RBP13.59□□□□□ -0.23
CDRT1-202ENST00000354433 ZNF214Q9UL59 606 aaPredicted RBP13.59□□□□□ -0.23
CDRT1-202ENST00000354433 ADAMTS5Q9UNA0 930 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 ZNF236Q9UL36 1845 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 RLFQ13129 1914 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
CDRT1-202ENST00000354433 ZBED4O75132 1171 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 PGK2P07205 417 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 BMP3P12645 472 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 ANO1Q5XXA6 986 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 LHX8Q68G74 356 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 ZNF589Q86UQ0 364 aaPredicted RBP13.58□□□□□ -0.23
CDRT1-202ENST00000354433 GMCL1P1Q8NEA9 526 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 MAML3Q96JK9 1138 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 ESYT1Q9BSJ8 1104 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 USP26Q9BXU7 913 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 FEM1BQ9UK73 627 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 SYNPO2Q9UMS6 1093 aa13.58□□□□□ -0.23
CDRT1-202ENST00000354433 CEP290O15078 2479 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 PFASO15067 1338 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 CYBAP13498 195 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 SLC1A4P43007 532 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-202ENST00000354433 STAT2P52630 851 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 REPS2Q8NFH8 660 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 MKL1Q969V6 931 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 RAVER2Q9HCJ3 691 aaKnown RBP13.58□□□□□ -0.24
CDRT1-202ENST00000354433 INCENPQ9NQS7 918 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 DIAPH3Q9NSV4 1193 aa13.58□□□□□ -0.24
CDRT1-202ENST00000354433 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-202ENST00000354433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDRT1-202ENST00000354433 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
CDRT1-202ENST00000354433 TMEM232C9JQI7 657 aa13.57□□□□□ -0.24
CDRT1-202ENST00000354433 NMT2O60551 498 aa13.57□□□□□ -0.24
CDRT1-202ENST00000354433 FGAP02671 866 aa13.57□□□□□ -0.24
CDRT1-202ENST00000354433 HSPD1P10809 573 aaKnown RBP13.57□□□□□ -0.24
CDRT1-202ENST00000354433 HAND2P61296 217 aa13.57□□□□□ -0.24
CDRT1-202ENST00000354433 TICAM2Q86XR7 235 aa13.57□□□□□ -0.24
CDRT1-202ENST00000354433 TRPV1Q8NER1 839 aa13.57□□□□□ -0.24
CDRT1-202ENST00000354433 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
CDRT1-202ENST00000354433 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
CDRT1-202ENST00000354433 HIP1O00291 1037 aa13.56□□□□□ -0.24
CDRT1-202ENST00000354433 SYN1P17600 705 aa13.56□□□□□ -0.24
CDRT1-202ENST00000354433 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
CDRT1-202ENST00000354433 PRAMEF19Q5SWL8 479 aa13.56□□□□□ -0.24
CDRT1-202ENST00000354433 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
CDRT1-202ENST00000354433 SNX21Q969T3 373 aa13.56□□□□□ -0.24
CDRT1-202ENST00000354433 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
CDRT1-202ENST00000354433 HOMER2Q9NSB8 354 aa13.56□□□□□ -0.24
CDRT1-202ENST00000354433 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
CDRT1-202ENST00000354433 MYH4Q9Y623 1939 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 SEPT4O43236 478 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 MCCP23508 829 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 KCTD1Q719H9 257 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 ANKRD35Q8N283 1001 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 TINF2Q9BSI4 451 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 SLC38A10Q9HBR0 1119 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 RIPK3Q9Y572 518 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 COL11A1P12107 1806 aaPredicted RBP13.55□□□□□ -0.24
CDRT1-202ENST00000354433 ZMYM6O95789 1325 aa13.55□□□□□ -0.24
CDRT1-202ENST00000354433 KBTBD13C9JR72 458 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 DNM1LO00429 736 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 ORC4O43929 436 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 COL6A1P12109 1028 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 FXR1P51114 621 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDRT1-202ENST00000354433 ATN1P54259 1190 aaPredicted RBP13.54□□□□□ -0.24
CDRT1-202ENST00000354433 ALX1Q15699 326 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
CDRT1-202ENST00000354433 RASGRP2Q7LDG7 609 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 FAM160B2Q86V87 743 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 CHURC1Q8WUH1 139 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 RUFY2Q8WXA3 655 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 GMCL1Q96IK5 515 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 KIF2CQ99661 725 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 IL17RBQ9NRM6 502 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 FBXO40Q9UH90 709 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 CNPY2Q9Y2B0 182 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 ATP2A1O14983 1001 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 OAZ1P54368 228 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 ZNF792Q3KQV3 632 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms