RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MLKLQ8NB16 471 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 TBC1D16Q8TBP0 767 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 TBCKQ8TEA7 893 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMC6-201ENST00000351948 CSRNP2Q9H175 543 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 TRPC6Q9Y210 931 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 CEMIPQ8WUJ3 1361 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 GOLGA6L9A6NEM1 432 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 NTSR2O95665 410 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 IGBP1P78318 339 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 GPT2Q8TD30 523 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 STAT2P52630 851 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 SEPT2Q15019 361 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 XKR9Q5GH70 373 aa15.3■□□□□ 0.04
SMC6-201ENST00000351948 SRRTQ9BXP5 876 aaKnown RBP15.3■□□□□ 0.04
SMC6-201ENST00000351948 TRIM6Q9C030 488 aaPredicted RBP15.3■□□□□ 0.04
SMC6-201ENST00000351948 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
SMC6-201ENST00000351948 BCCIPQ9P287 314 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMC6-201ENST00000351948 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMC6-201ENST00000351948 NKX1-1Q15270 411 aaPredicted RBP15.29■□□□□ 0.04
SMC6-201ENST00000351948 KIAA1468Q9P260 1216 aa15.29■□□□□ 0.04
SMC6-201ENST00000351948 USP17L5A8MUK1 530 aa15.29■□□□□ 0.04
SMC6-201ENST00000351948 CYP2J2P51589 502 aa15.29■□□□□ 0.04
SMC6-201ENST00000351948 RC3H1Q5TC82 1133 aaKnown RBP15.29■□□□□ 0.04
SMC6-201ENST00000351948 GRAMD1CQ8IYS0 662 aa15.29■□□□□ 0.04
SMC6-201ENST00000351948 SLC39A2Q9NP94 309 aa15.29■□□□□ 0.04
SMC6-201ENST00000351948 ZKSCAN5Q9Y2L8 839 aa15.29■□□□□ 0.04
SMC6-201ENST00000351948 KIF23Q02241 960 aaPredicted RBP15.28■□□□□ 0.04
SMC6-201ENST00000351948 LRMPQ12912 555 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 INTS5Q6P9B9 1019 aaKnown RBP15.28■□□□□ 0.04
SMC6-201ENST00000351948 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMC6-201ENST00000351948 TSPYL1Q9H0U9 437 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 KIAA1024Q9UPX6 916 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMC6-201ENST00000351948 FER1L4A9Z1Z3 1794 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 GSG1L2A8MUP6 293 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 AKR1B15C9JRZ8 316 aaPredicted RBP15.28■□□□□ 0.04
SMC6-201ENST00000351948 IFNAR1P17181 557 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 BAG1Q99933 345 aaPredicted RBP15.28■□□□□ 0.04
SMC6-201ENST00000351948 PCDHA4Q9UN74 947 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 IFFO1Q0D2I5 559 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 TOB2Q14106 344 aaPredicted RBP15.28■□□□□ 0.04
SMC6-201ENST00000351948 MTERF4Q7Z6M4 381 aaKnown RBP15.28■□□□□ 0.04
SMC6-201ENST00000351948 PABPC4Q13310 644 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMC6-201ENST00000351948 ZNF569Q5MCW4 686 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 SEPT14Q6ZU15 432 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 ZNF354CQ86Y25 554 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 FAM207AQ9NSI2 230 aaPredicted RBP15.28■□□□□ 0.04
SMC6-201ENST00000351948 UBN2Q6ZU65 1347 aa15.28■□□□□ 0.04
SMC6-201ENST00000351948 KCTD2Q14681 263 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 CDC37Q16543 378 aaPredicted RBP15.27■□□□□ 0.04
SMC6-201ENST00000351948 DPP9Q86TI2 863 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 NT5C3AQ9H0P0 336 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 MROH7-TTC4A0A0A0MT08 1334 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 KRT19P08727 400 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 SYDE2Q5VT97 1194 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 CTR9Q6PD62 1173 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 MCF2L2Q86YR7 1114 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 RNF169Q8NCN4 708 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 CEP95Q96GE4 821 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 WRNIP1Q96S55 665 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 TMEM47Q9BQJ4 181 aa15.27■□□□□ 0.04
SMC6-201ENST00000351948 MEIS1O00470 390 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 FOXP4Q8IVH2 680 aaPredicted RBP15.27■□□□□ 0.03
SMC6-201ENST00000351948 PPP1R9BQ96SB3 815 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 NLRC4Q9NPP4 1024 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 IQGAP1P46940 1657 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 CALUO43852 315 aaPredicted RBP15.27■□□□□ 0.03
SMC6-201ENST00000351948 DKC1O60832 514 aaKnown RBP eCLIP15.27■□□□□ 0.03
SMC6-201ENST00000351948 TACC1O75410 805 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 CMA1P23946 247 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 LIFRP42702 1097 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 WDR44Q5JSH3 913 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 SYT10Q6XYQ8 523 aa15.27■□□□□ 0.03
SMC6-201ENST00000351948 KLRK1P26718 216 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 SMYD4Q8IYR2 804 aaPredicted RBP15.26■□□□□ 0.03
SMC6-201ENST00000351948 EHBP1Q8NDI1 1231 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 PCDHB6Q9Y5E3 794 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 KRT86O43790 486 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 MMP1P03956 469 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 LRCH2Q5VUJ6 765 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 ENAHQ8N8S7 591 aaPredicted RBP15.26■□□□□ 0.03
SMC6-201ENST00000351948 ZHX2Q9Y6X8 837 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 EIF2AK2P19525 551 aaKnown RBP15.26■□□□□ 0.03
SMC6-201ENST00000351948 CUL4AQ13619 759 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 SF3B3Q15393 1217 aaKnown RBP15.26■□□□□ 0.03
SMC6-201ENST00000351948 KRBA2Q6ZNG9 492 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 CLEC10AQ8IUN9 316 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 CNGA4Q8IV77 575 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 MAP7D2Q96T17 732 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 GTPBP4Q9BZE4 634 aaKnown RBP15.26■□□□□ 0.03
SMC6-201ENST00000351948 ABT1Q9ULW3 272 aaKnown RBP15.26■□□□□ 0.03
SMC6-201ENST00000351948 KRT9P35527 623 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 KRT83P78385 493 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 TRPC3Q13507 836 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 IFI16Q16666 785 aaKnown RBP15.26■□□□□ 0.03
SMC6-201ENST00000351948 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 STAG1Q8WVM7 1258 aa15.26■□□□□ 0.03
SMC6-201ENST00000351948 DNM2P50570 870 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms