RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 COL13A1Q5TAT6 717 aaPredicted RBP16.28■□□□□ 0.2
SEC13-202ENST00000350697 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 CD99L2Q8TCZ2 262 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 UPF2Q9HAU5 1272 aaKnown RBP16.28■□□□□ 0.2
SEC13-202ENST00000350697 PEX10O60683 326 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 ZBED4O75132 1171 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 GOLGA8HP0CJ92 632 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 CCNA1P78396 465 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 Q3C1V9 767 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 TTBK2Q6IQ55 1244 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 Q6ZUG5 572 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 CTDP1Q9Y5B0 961 aaPredicted RBP16.28■□□□□ 0.2
SEC13-202ENST00000350697 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
SEC13-202ENST00000350697 COL11A1P12107 1806 aaPredicted RBP16.27■□□□□ 0.2
SEC13-202ENST00000350697 CALM1P0DP23 149 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 CALM2P0DP24 149 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 CALM3P0DP25 149 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 SLC16A2P36021 539 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 PSMC4P43686 418 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 GRM4Q14833 912 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 TMEM132BQ14DG7 1078 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 SYDE2Q5VT97 1194 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 SYNE3Q6ZMZ3 975 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 REPS2Q8NFH8 660 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 AGXT2Q9BYV1 514 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.19
SEC13-202ENST00000350697 SPATC1LQ9H0A9 340 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 SLC38A10Q9HBR0 1119 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.19
SEC13-202ENST00000350697 PALM3A6NDB9 673 aaPredicted RBP16.26■□□□□ 0.19
SEC13-202ENST00000350697 ATP2A1O14983 1001 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
SEC13-202ENST00000350697 GNRH1P01148 92 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 FCGRTP55899 365 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 PLS1Q14651 629 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 APOA5Q6Q788 366 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 CCAR1Q8IX12 1150 aaKnown RBP16.26■□□□□ 0.19
SEC13-202ENST00000350697 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
SEC13-202ENST00000350697 MYL10Q9BUA6 226 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 BACH2Q9BYV9 841 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 C22orf23Q9BZE7 217 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 ARHGAP39Q9C0H5 1083 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 MAD2L2Q9UI95 211 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
SEC13-202ENST00000350697 MGAMO43451 1857 aa16.26■□□□□ 0.19
SEC13-202ENST00000350697 KLRF2D3W0D1 207 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 CTGFP29279 349 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 MAPK4P31152 587 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 KIF5BP33176 963 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 STAT3P40763 770 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 RBM25P49756 843 aaKnown RBP16.25■□□□□ 0.19
SEC13-202ENST00000350697 OAZ1P54368 228 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 CAP1Q01518 475 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 STAG2Q8N3U4 1231 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 SHCBP1Q8NEM2 672 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 BRF1Q92994 677 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 TRIM47Q96LD4 638 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
SEC13-202ENST00000350697 TEX13BQ9BXU2 312 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 UBA5Q9GZZ9 404 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 PORCNQ9H237 461 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 EFCC1Q9HA90 598 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 PDRG1Q9NUG6 133 aa16.25■□□□□ 0.19
SEC13-202ENST00000350697 ZSWIM8A7E2V4 1837 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 KLF18A0A0U1RQI7 1052 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 TNPO2O14787 897 aaKnown RBP16.24■□□□□ 0.19
SEC13-202ENST00000350697 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
SEC13-202ENST00000350697 SLC25A27O95847 323 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 HOXD10P28358 340 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 RCAN1P53805 252 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 CTU1Q7Z7A3 348 aaKnown RBP16.24■□□□□ 0.19
SEC13-202ENST00000350697 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 RIOX2Q8IUF8 465 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 TNS4Q8IZW8 715 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 CPXCR1Q8N123 301 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 RANBP17Q9H2T7 1088 aaKnown RBP16.24■□□□□ 0.19
SEC13-202ENST00000350697 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 TRIM17Q9Y577 477 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 DOCK3Q8IZD9 2030 aa16.24■□□□□ 0.19
SEC13-202ENST00000350697 ZBTB43O43298 467 aa16.23■□□□□ 0.19
SEC13-202ENST00000350697 COPB2P35606 906 aa16.23■□□□□ 0.19
SEC13-202ENST00000350697 GNAQP50148 359 aa16.23■□□□□ 0.19
SEC13-202ENST00000350697 APOBRQ0VD83 1088 aa16.23■□□□□ 0.19
SEC13-202ENST00000350697 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
SEC13-202ENST00000350697 OTOP1Q7RTM1 612 aa16.23■□□□□ 0.19
SEC13-202ENST00000350697 ADGRF4Q8IZF3 695 aa16.23■□□□□ 0.19
SEC13-202ENST00000350697 COA7Q96BR5 231 aa16.23■□□□□ 0.19
SEC13-202ENST00000350697 CPVLQ9H3G5 476 aa16.23■□□□□ 0.19
SEC13-202ENST00000350697 CWC22Q9HCG8 908 aaKnown RBP16.23■□□□□ 0.19
SEC13-202ENST00000350697 RAVER2Q9HCJ3 691 aaKnown RBP16.23■□□□□ 0.19
SEC13-202ENST00000350697 DHX16O60231 1041 aaKnown RBP16.22■□□□□ 0.19
SEC13-202ENST00000350697 ERCC3P19447 782 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 RXRAP19793 462 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 SNAP25P60880 206 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 TOB2Q14106 344 aaPredicted RBP16.22■□□□□ 0.19
SEC13-202ENST00000350697 WDR78Q5VTH9 848 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 CCDC174Q6PII3 467 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms