RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
CAPN3-203ENST00000349748 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-203ENST00000349748 EVI5O60447 810 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 USHBP1Q8N6Y0 703 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 CCT6BQ92526 530 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 OVOS2A0A0J9YW53 1432 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 OVOS2Q6IE36 1432 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 GMNCA6NCL1 334 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 GYPCP04921 128 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 TMOD1P28289 359 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 LACTB2Q53H82 288 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-203ENST00000349748 ACBD5Q5T8D3 534 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-203ENST00000349748 CCDC63Q8NA47 563 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 KCNV2Q8TDN2 545 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 MAPK8IP1Q9UQF2 711 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-203ENST00000349748 KDRP35968 1356 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 LIN7AO14910 233 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-203ENST00000349748 PPIP5K2O43314 1243 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 ERICH1Q86X53 443 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 CACNA2D3Q8IZS8 1091 aa11.85□□□□□ -0.51
CAPN3-203ENST00000349748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.85□□□□□ -0.51
CAPN3-203ENST00000349748 REXO2Q9Y3B8 237 aaKnown RBP11.85□□□□□ -0.51
CAPN3-203ENST00000349748 A0A1B0GTH6 734 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 POLE2P56282 527 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 MYBPC3Q14896 1274 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 SLX1AQ9BQ83 275 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 NDST4Q9H3R1 872 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 SMARCAL1Q9NZC9 954 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 DCCP43146 1447 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 PHF20L1A8MW92 1017 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 PSMD14O00487 310 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 CKAP4Q07065 602 aaKnown RBP11.84□□□□□ -0.51
CAPN3-203ENST00000349748 FLIIQ13045 1269 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 ITGB3BPQ13352 177 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-203ENST00000349748 ANKRD20A2Q5SQ80 823 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 CFAP58Q5T655 872 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 ANKRD20A1Q5TYW2 823 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 ANKRD20A3Q5VUR7 823 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 ECHDC1Q9NTX5 307 aa11.84□□□□□ -0.51
CAPN3-203ENST00000349748 RASSF10A6NK89 507 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 YEATS4O95619 227 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 FAM153BP0C7A2 387 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 POLD1P28340 1107 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 EPHB4P54760 987 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 SLMAPQ14BN4 828 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 FAM153CQ494X1 144 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 SHC4Q6S5L8 630 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 EVI5LQ96CN4 794 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 CHP1Q99653 195 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 JADE2Q9NQC1 790 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 FAM153AQ9UHL3 310 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 WWC3Q9ULE0 1092 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 A8MUI8 341 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 STXBP3O00186 592 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 ALDH1B1P30837 517 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 CD151P48509 253 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 PAPD7Q5XG87 772 aaKnown RBP11.83□□□□□ -0.52
CAPN3-203ENST00000349748 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-203ENST00000349748 CNBD1Q8NA66 436 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 NOC3LQ8WTT2 800 aaKnown RBP11.83□□□□□ -0.52
CAPN3-203ENST00000349748 ZFAND2BQ8WV99 257 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 MTRQ99707 1265 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 LLPHQ9BRT6 129 aaKnown RBP11.83□□□□□ -0.52
CAPN3-203ENST00000349748 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 AATFQ9NY61 560 aaKnown RBP eCLIP11.83□□□□□ -0.52
CAPN3-203ENST00000349748 WDR35Q9P2L0 1181 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 ZMYM6O95789 1325 aa11.83□□□□□ -0.52
CAPN3-203ENST00000349748 LRRD1A4D1F6 860 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 PDHA1P08559 390 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 TAF11Q15544 211 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 ZMYM1Q5SVZ6 1142 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 CCDC70Q6NSX1 233 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 APTXQ7Z2E3 356 aaKnown RBP11.82□□□□□ -0.52
CAPN3-203ENST00000349748 RPGRIP1Q96KN7 1286 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 ATP6V1G3Q96LB4 118 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 SENP2Q9HC62 589 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 MAN1B1Q9UKM7 699 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 TRAPPC3O43617 180 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 HOXC9P31274 260 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 GUCY2FP51841 1108 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 STX17P56962 302 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 ANO1Q5XXA6 986 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 CCDC170Q8IYT3 715 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 IQCKQ8N0W5 287 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 ESYT3A0FGR9 886 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 KIF28PB7ZC32 967 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 CHGBP05060 677 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 FDPSP14324 419 aaKnown RBP11.82□□□□□ -0.52
CAPN3-203ENST00000349748 PAX3P23760 479 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 KCNJ2P63252 427 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 ADAM9Q13443 819 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms