RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PTPN14Q15678 1187 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 TBC1D22AQ8WUA7 517 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 TDRD3Q9H7E2 651 aaKnown RBP15.74■□□□□ 0.11
TRIM4-201ENST00000349062 PCDHA4Q9UN74 947 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 RAD17O75943 681 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 CD44P16070 742 aaKnown RBP15.73■□□□□ 0.11
TRIM4-201ENST00000349062 COL5A3P25940 1745 aaPredicted RBP15.73■□□□□ 0.11
TRIM4-201ENST00000349062 CALML3P27482 149 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 TXLNAP40222 546 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 EZH2Q15910 746 aaKnown RBP15.73■□□□□ 0.11
TRIM4-201ENST00000349062 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.73■□□□□ 0.11
TRIM4-201ENST00000349062 SP8Q8IXZ3 490 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 TEKT1Q969V4 418 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 TIGD1Q96MW7 591 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 VPS16Q9H269 839 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 SERPINB13Q9UIV8 391 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 TUBE1Q9UJT0 475 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 PCP11498 1178 aaKnown RBP15.73■□□□□ 0.11
TRIM4-201ENST00000349062 IL1R1P14778 569 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 GRM4Q14833 912 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 CEP135Q66GS9 1140 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 CDC42EP5Q6NZY7 148 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 HPS3Q969F9 1004 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 ZFP91Q96JP5 570 aaPredicted RBP15.73■□□□□ 0.11
TRIM4-201ENST00000349062 IRS2Q9Y4H2 1338 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 ONECUT3O60422 494 aaPredicted RBP15.73■□□□□ 0.11
TRIM4-201ENST00000349062 KIF20AO95235 890 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 NPR1P16066 1061 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 PCDHA6Q9UN73 950 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 PCDHA8Q9Y5H6 950 aa15.73■□□□□ 0.11
TRIM4-201ENST00000349062 NRDCO43847 1150 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 PPP4CP60510 307 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 RAD51AP2Q09MP3 1159 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 USH1GQ495M9 461 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 CCDC178Q5BJE1 867 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 SARM1Q6SZW1 724 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 IQUBQ8NA54 791 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 CRAMP1Q96RY5 1269 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 DUOX1Q9NRD9 1551 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 FGRP09769 529 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 GNAQP50148 359 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 DESI2Q9BSY9 194 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 MYH6P13533 1939 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 TCP10L2B9ZVM9 353 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 TEX33O43247 280 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 PDE6BP35913 854 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 CRKP46108 304 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 TRMT1LQ7Z2T5 733 aaKnown RBP15.72■□□□□ 0.11
TRIM4-201ENST00000349062 TBCKQ8TEA7 893 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 COA1Q9GZY4 146 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 OGFRQ9NZT2 677 aa15.72■□□□□ 0.11
TRIM4-201ENST00000349062 RBM26Q5T8P6 1007 aaKnown RBP15.71■□□□□ 0.11
TRIM4-201ENST00000349062 C16orf86Q6ZW13 317 aa15.71■□□□□ 0.11
TRIM4-201ENST00000349062 DEFB132Q7Z7B7 95 aa15.71■□□□□ 0.11
TRIM4-201ENST00000349062 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
TRIM4-201ENST00000349062 TRIM49BA6NDI0 452 aa15.71■□□□□ 0.11
TRIM4-201ENST00000349062 HLA-DOAP06340 250 aa15.71■□□□□ 0.11
TRIM4-201ENST00000349062 SLFN14P0C7P3 912 aa15.71■□□□□ 0.11
TRIM4-201ENST00000349062 MTA3Q9BTC8 594 aa15.71■□□□□ 0.11
TRIM4-201ENST00000349062 HSD3B7Q9H2F3 369 aa15.71■□□□□ 0.11
TRIM4-201ENST00000349062 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.71■□□□□ 0.11
TRIM4-201ENST00000349062 ZNF215Q9UL58 517 aaPredicted RBP15.71■□□□□ 0.11
TRIM4-201ENST00000349062 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
TRIM4-201ENST00000349062 STXBP3O00186 592 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 IDEP14735 1019 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 RXRBP28702 533 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 CCZ1BP86790 482 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 CCZ1P86791 482 aaPredicted RBP15.7■□□□□ 0.1
TRIM4-201ENST00000349062 MDM2Q00987 491 aaPredicted RBP15.7■□□□□ 0.1
TRIM4-201ENST00000349062 SYT10Q6XYQ8 523 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 DYMQ7RTS9 669 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 NEDD1Q8NHV4 660 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 ZHX3Q9H4I2 956 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 DOCK2Q92608 1830 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 LAMB2P55268 1798 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 ATP2C1P98194 919 aaPredicted RBP15.7■□□□□ 0.1
TRIM4-201ENST00000349062 CCDC148Q8NFR7 591 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 FERMT2Q96AC1 680 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 MASTLQ96GX5 879 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 POLD4Q9HCU8 107 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 C6orf50Q9HD87 102 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 TAB2Q9NYJ8 693 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 SYNRGQ9UMZ2 1314 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L10C9JJH3 530 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 ECE2O60344 883 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 ST7Q9NRC1 585 aa15.7■□□□□ 0.1
TRIM4-201ENST00000349062 DDTLA6NHG4 134 aaPredicted RBP15.69■□□□□ 0.1
TRIM4-201ENST00000349062 CCDC84Q86UT8 332 aaPredicted RBP15.69■□□□□ 0.1
TRIM4-201ENST00000349062 ANKRD7Q92527 254 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 BARHL2Q9NY43 387 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 TDP2O95551 362 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 HOXA10P31260 410 aaPredicted RBP15.69■□□□□ 0.1
TRIM4-201ENST00000349062 RCAN1P53805 252 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 DPYDQ12882 1025 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 ELF2Q15723 593 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 REXO1Q8N1G1 1221 aaKnown RBP15.69■□□□□ 0.1
TRIM4-201ENST00000349062 TNFRSF25Q93038 417 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms