RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 KANK3Q6NY19 840 aa20.92■□□□□ 0.94
SCARF1-202ENST00000348987 NUP133Q8WUM0 1156 aa20.92■□□□□ 0.94
SCARF1-202ENST00000348987 EPN1Q9Y6I3 576 aaPredicted RBP20.92■□□□□ 0.94
SCARF1-202ENST00000348987 NUP98P52948 1817 aa20.92■□□□□ 0.94
SCARF1-202ENST00000348987 ITIH6Q6UXX5 1313 aa20.92■□□□□ 0.94
SCARF1-202ENST00000348987 MYO1FO00160 1098 aa20.92■□□□□ 0.94
SCARF1-202ENST00000348987 INTS5Q6P9B9 1019 aaKnown RBP20.92■□□□□ 0.94
SCARF1-202ENST00000348987 MARCH10Q8NA82 808 aaPredicted RBP20.92■□□□□ 0.94
SCARF1-202ENST00000348987 CSRNP2Q9H175 543 aa20.92■□□□□ 0.94
SCARF1-202ENST00000348987 CLGNO14967 610 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 NDUFA10O95299 355 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 ITPK1Q13572 414 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 DDB1Q16531 1140 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 RTN1Q16799 776 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 PRPF38AQ8NAV1 312 aaKnown RBP20.91■□□□□ 0.94
SCARF1-202ENST00000348987 SHISA4Q96DD7 197 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 hCG_1642624A0A1W2PR95 340 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 CRKLP46109 303 aaKnown RBP20.91■□□□□ 0.94
SCARF1-202ENST00000348987 WTAPQ15007 396 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 KRT31Q15323 416 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 FAM205CA6NFA0 338 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 ZNF185O15231 689 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 LRP2BPQ9P2M1 347 aa20.91■□□□□ 0.94
SCARF1-202ENST00000348987 ECM29Q5VYK3 1845 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 A0A087X0B3 334 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 KRT23Q9C075 422 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 CNNM2Q9H8M5 875 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 STK36Q9NRP7 1315 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 MINDY4BA8MYZ0 360 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 PPP1R3GB7ZBB8 358 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 H0YHG0 523 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 DPYDQ12882 1025 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 CRACR2BQ8N4Y2 399 aaPredicted RBP20.9■□□□□ 0.94
SCARF1-202ENST00000348987 CAGE1Q8TC20 777 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 STAG1Q8WVM7 1258 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 JAKMIP2Q96AA8 810 aa20.9■□□□□ 0.94
SCARF1-202ENST00000348987 RRP36Q96EU6 259 aaKnown RBP20.9■□□□□ 0.94
SCARF1-202ENST00000348987 COL16A1Q07092 1604 aaPredicted RBP20.89■□□□□ 0.93
SCARF1-202ENST00000348987 CCDC122Q5T0U0 273 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 PAPD7Q5XG87 772 aaKnown RBP20.89■□□□□ 0.93
SCARF1-202ENST00000348987 ANKRD18AQ8IVF6 992 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 ABCF2Q9UG63 623 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 CTNND2Q9UQB3 1225 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 SRPRBQ9Y5M8 271 aaKnown RBP20.89■□□□□ 0.93
SCARF1-202ENST00000348987 PDE2AO00408 941 aaPredicted RBP20.89■□□□□ 0.93
SCARF1-202ENST00000348987 SETQ01105 290 aaPredicted RBP20.89■□□□□ 0.93
SCARF1-202ENST00000348987 SND1Q7KZF4 910 aaKnown RBP eCLIP20.89■□□□□ 0.93
SCARF1-202ENST00000348987 EPSTI1Q96J88 318 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 CABS1Q96KC9 395 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 SH3GL2Q99962 352 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 HAUS4Q9H6D7 363 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 TAB2Q9NYJ8 693 aa20.89■□□□□ 0.93
SCARF1-202ENST00000348987 COL14A1Q05707 1796 aaKnown RBP20.88■□□□□ 0.93
SCARF1-202ENST00000348987 SEMA3EO15041 775 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 C2orf54Q08AI8 447 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 FANCBQ8NB91 859 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 CYP2D7A0A087X1C5 515 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 NDUFAB1O14561 156 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 FNTAP49354 379 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 CHRNDQ07001 517 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 SAFBQ15424 915 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCARF1-202ENST00000348987 GBP6Q6ZN66 633 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 TRIM22Q8IYM9 498 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 ZNF654Q8IZM8 581 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 ZNF579Q8NAF0 562 aaKnown RBP20.88■□□□□ 0.93
SCARF1-202ENST00000348987 CABP5Q9NP86 173 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 GNL3LQ9NVN8 582 aaKnown RBP20.88■□□□□ 0.93
SCARF1-202ENST00000348987 FAM184BQ9ULE4 1060 aa20.88■□□□□ 0.93
SCARF1-202ENST00000348987 ANKRD36CQ5JPF3 1778 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 LOC102724428A0A0B4J2F2 783 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 SIK1P57059 783 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 RILPL1Q5EBL4 403 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 EARS2Q5JPH6 523 aaKnown RBP20.87■□□□□ 0.93
SCARF1-202ENST00000348987 PTF1AQ7RTS3 328 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 AENQ8WTP8 325 aaKnown RBP20.87■□□□□ 0.93
SCARF1-202ENST00000348987 STAMQ92783 540 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 PAGE5Q96GU1 130 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 RPGRIP1Q96KN7 1286 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 NACAP1Q9BZK3 213 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 LRP5O75197 1615 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 COL4A1P02462 1669 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 CYP7A1P22680 504 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 HERVK_113P62684 666 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 CKAP4Q07065 602 aaKnown RBP20.87■□□□□ 0.93
SCARF1-202ENST00000348987 PPARAQ07869 468 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 OTUD6BQ8N6M0 293 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 FAM212AQ96EL1 285 aa20.87■□□□□ 0.93
SCARF1-202ENST00000348987 GYG1P46976 350 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 COPB1P53618 953 aaKnown RBP20.86■□□□□ 0.93
SCARF1-202ENST00000348987 PDCLQ13371 301 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 CD248Q9HCU0 757 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 CCDC87Q9NVE4 849 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 SPATA31A1Q5TZJ5 1347 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 PNPLA7Q6ZV29 1317 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 PRDM1O75626 825 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 MRPS25P82663 173 aaKnown RBP20.86■□□□□ 0.93
SCARF1-202ENST00000348987 EVX2Q03828 476 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 HDAC7Q8WUI4 952 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 ARL8AQ96BM9 186 aa20.86■□□□□ 0.93
SCARF1-202ENST00000348987 NIP7Q9Y221 180 aaKnown RBP eCLIP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms