RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 USP14P54578 494 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 GPSM2P81274 684 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 AMPD2Q01433 879 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 NTRK3Q16288 839 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 SWT1Q5T5J6 900 aaKnown RBP17.86■□□□□ 0.45
HMGA1-202ENST00000347617 ANKRD20A12PQ8NF67 263 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 NSUN4Q96CB9 384 aaKnown RBP17.86■□□□□ 0.45
HMGA1-202ENST00000347617 NAPBQ9H115 298 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 CNNM2Q9H8M5 875 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 ARMT1Q9H993 441 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 GGA1Q9UJY5 639 aa17.86■□□□□ 0.45
HMGA1-202ENST00000347617 SHOX2O60902 331 aaPredicted RBP17.85■□□□□ 0.45
HMGA1-202ENST00000347617 RNF40O75150 1001 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 BMP15O95972 392 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 MMP1P03956 469 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 SRGNP10124 158 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 IFNAR1P17181 557 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 USP8P40818 1118 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 RCAN1P53805 252 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 ZNF662Q6ZS27 426 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 PACS2Q86VP3 889 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 EHBP1Q8NDI1 1231 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 GSDMAQ96QA5 445 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 RIOK1Q9BRS2 568 aaKnown RBP17.85■□□□□ 0.45
HMGA1-202ENST00000347617 IRX2Q9BZI1 471 aaPredicted RBP17.85■□□□□ 0.45
HMGA1-202ENST00000347617 SLC4A4Q9Y6R1 1079 aa17.85■□□□□ 0.45
HMGA1-202ENST00000347617 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 TIAM2Q8IVF5 1701 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 RHOXF2BP0C7M4 288 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 IL1R1P14778 569 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 CUL4BQ13620 913 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 SLC15A2Q16348 729 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 MMS22LQ6ZRQ5 1243 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 TADA2BQ86TJ2 420 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 LCORLQ8N3X6 602 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 RHOXF2Q9BQY4 288 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 PYM1Q9BRP8 204 aaKnown RBP17.84■□□□□ 0.45
HMGA1-202ENST00000347617 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.455e-10■□□□□ 8.3
HMGA1-202ENST00000347617 LIMA1Q9UHB6 759 aaKnown RBP17.84■□□□□ 0.45
HMGA1-202ENST00000347617 ANAPC4Q9UJX5 808 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 ATP6V0A2Q9Y487 856 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 DUOX1Q9NRD9 1551 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 LRRC37AA6NMS7 1700 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 FOXN1O15353 648 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 N4BP1O75113 896 aaKnown RBP17.84■□□□□ 0.45
HMGA1-202ENST00000347617 PRPF6O94906 941 aaKnown RBP17.84■□□□□ 0.45
HMGA1-202ENST00000347617 PRR29P0C7W0 189 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 PCP11498 1178 aaKnown RBP17.84■□□□□ 0.45
HMGA1-202ENST00000347617 IQCEQ6IPM2 695 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 GBP6Q6ZN66 633 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 TRMT44Q8IYL2 757 aaKnown RBP17.84■□□□□ 0.45
HMGA1-202ENST00000347617 TRIM22Q8IYM9 498 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 CEP89Q96ST8 783 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 MYCBPQ99417 103 aaPredicted RBP17.84■□□□□ 0.45
HMGA1-202ENST00000347617 NCAPGQ9BPX3 1015 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 NBPF3Q9H094 633 aa17.84■□□□□ 0.45
HMGA1-202ENST00000347617 EPB41L4AQ9HCS5 686 aaPredicted RBP17.84■□□□□ 0.45
HMGA1-202ENST00000347617 PSMD14O00487 310 aa17.83■□□□□ 0.44
HMGA1-202ENST00000347617 TEX33O43247 280 aa17.83■□□□□ 0.44
HMGA1-202ENST00000347617 MMP10P09238 476 aa17.83■□□□□ 0.44
HMGA1-202ENST00000347617 CERS3Q8IU89 383 aa17.83■□□□□ 0.44
HMGA1-202ENST00000347617 ANKRD31Q8N7Z5 1873 aa17.83■□□□□ 0.44
HMGA1-202ENST00000347617 AIFM3Q96NN9 605 aa17.83■□□□□ 0.44
HMGA1-202ENST00000347617 KRT23Q9C075 422 aa17.83■□□□□ 0.44
HMGA1-202ENST00000347617 RNF41Q9H4P4 317 aaPredicted RBP17.83■□□□□ 0.44
HMGA1-202ENST00000347617 HAUS4Q9H6D7 363 aa17.83■□□□□ 0.44
HMGA1-202ENST00000347617 MYH6P13533 1939 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 LRRC10BA6NIK2 292 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 LRRIQ3A6PVS8 624 aaPredicted RBP17.82■□□□□ 0.44
HMGA1-202ENST00000347617 CASP14P31944 242 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 NT5C2P49902 561 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 MECOMQ03112 1051 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 MAPK8IP2Q13387 824 aaPredicted RBP17.82■□□□□ 0.44
HMGA1-202ENST00000347617 PTPN21Q16825 1174 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 TRAPPC11Q7Z392 1133 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 SH3RF1Q7Z6J0 888 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 MASTLQ96GX5 879 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 MED15Q96RN5 788 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 STK32BQ9NY57 414 aa17.82■□□□□ 0.44
HMGA1-202ENST00000347617 ATXN2Q99700 1313 aaKnown RBP17.82■□□□□ 0.44
HMGA1-202ENST00000347617 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
HMGA1-202ENST00000347617 UFL1O94874 794 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 GYPCP04921 128 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 ARHGAP25P42331 645 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 GSTO1P78417 241 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 STIM1Q13586 685 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 AKNAD1Q5T1N1 836 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 CCDC70Q6NSX1 233 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 NFXL1Q6ZNB6 911 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 ADGRA1Q86SQ6 560 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 TBC1D16Q8TBP0 767 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 ZNF384Q8TF68 577 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 COG1Q8WTW3 980 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 CRACR2AQ9BSW2 395 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 CD209Q9NNX6 404 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 ABHD10Q9NUJ1 306 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 HPCAL4Q9UM19 191 aa17.81■□□□□ 0.44
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