RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SLC44A5Q8NCS7 719 aa18.3■□□□□ 0.52
SMARCA4-201ENST00000344626 CD2APQ9Y5K6 639 aa18.3■□□□□ 0.52
SMARCA4-201ENST00000344626 POLR2DO15514 142 aaKnown RBP18.3■□□□□ 0.52
SMARCA4-201ENST00000344626 URI1O94763 535 aaPredicted RBP18.3■□□□□ 0.52
SMARCA4-201ENST00000344626 ECE1P42892 770 aa18.3■□□□□ 0.52
SMARCA4-201ENST00000344626 HMGCS2P54868 508 aa18.3■□□□□ 0.52
SMARCA4-201ENST00000344626 JAK2O60674 1132 aa18.3■□□□□ 0.52
SMARCA4-201ENST00000344626 NOSTRINQ8IVI9 506 aa18.3■□□□□ 0.52
SMARCA4-201ENST00000344626 MROH7-TTC4A0A0A0MT08 1334 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 H0YCG3 227 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 MAP1SQ66K74 1059 aaPredicted RBP18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 PLA2G12BQ9BX93 195 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 MYOZ2Q9NPC6 264 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 NRBP2Q9NSY0 501 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 SYDE2Q5VT97 1194 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 SUGT1Q9Y2Z0 365 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 SLIT1O75093 1534 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 SNAP25P60880 206 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 MAP9Q49MG5 647 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 FASTKD5Q7L8L6 764 aaKnown RBP18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 PTF1AQ7RTS3 328 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 DEFB129Q9H1M3 183 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 KIFAP3Q92845 792 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 CENPHQ9H3R5 247 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 PCDHA12Q9UN75 941 aa18.29■□□□□ 0.52
SMARCA4-201ENST00000344626 ESPNB1AK53 854 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 XKR9Q5GH70 373 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 INF2Q27J81 1249 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 ZNF771Q7L3S4 317 aaPredicted RBP18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 ARHGAP23Q9P227 1491 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 SRGNP10124 158 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 KRT83P78385 493 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 FOXO4P98177 505 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 DEPTORQ8TB45 409 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 DDX25Q9UHL0 483 aaKnown RBP18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 EIF2AK2P19525 551 aaKnown RBP18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 MYL5Q02045 173 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 RSPH3Q86UC2 560 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 ZBTB8OSQ8IWT0 167 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 ABI1Q8IZP0 508 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 RNF26Q9BY78 433 aaPredicted RBP18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 BCORL1Q5H9F3 1711 aa18.28■□□□□ 0.52
SMARCA4-201ENST00000344626 BMS1Q14692 1282 aaKnown RBP18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 RPS12P25398 132 aaKnown RBP18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 CCDC117Q8IWD4 279 aaPredicted RBP18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 MEGF6O75095 1541 aa18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 SNX16P57768 344 aa18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 TTC14Q96N46 770 aa18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 FAM193BQ96PV7 902 aaPredicted RBP18.27■□□□□ 0.52
SMARCA4-201ENST00000344626 GOLGA6L10A0A0M3HER8 536 aa18.27■□□□□ 0.51
SMARCA4-201ENST00000344626 CDHR1Q96JP9 859 aa18.27■□□□□ 0.51
SMARCA4-201ENST00000344626 STX10O60499 249 aa18.27■□□□□ 0.51
SMARCA4-201ENST00000344626 IGSF3O75054 1194 aa18.27■□□□□ 0.51
SMARCA4-201ENST00000344626 PDIA3P30101 505 aaKnown RBP18.27■□□□□ 0.51
SMARCA4-201ENST00000344626 MRPL44Q9H9J2 332 aaKnown RBP18.27■□□□□ 0.51
SMARCA4-201ENST00000344626 OR52Z1P0C646 297 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 CCDC42Q96M95 316 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 SPECC1Q5M775 1068 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 MYSM1Q5VVJ2 828 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 SNRNP48Q6IEG0 339 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 CTNND2Q9UQB3 1225 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 LEO1Q8WVC0 666 aaPredicted RBP18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 PIGSQ96S52 555 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 NOC4LQ9BVI4 516 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 RIPOR2Q9Y4F9 1068 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 SLFNL1Q499Z3 407 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 VWA3BQ502W6 1294 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 FAM173BQ6P4H8 233 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 DYMQ7RTS9 669 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 MLKLQ8NB16 471 aa18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 TRMT1Q9NXH9 659 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 COL5A2P05997 1499 aaPredicted RBP18.26■□□□□ 0.51
SMARCA4-201ENST00000344626 TMEM131LA2VDJ0 1609 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 TAX1BP1Q86VP1 789 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 ZNF70Q9UC06 446 aaPredicted RBP18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 GCNT3O95395 438 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 CYP21A2P08686 494 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 ZNF827Q17R98 1081 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 RAVER2Q9HCJ3 691 aaKnown RBP18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 DAGLAQ9Y4D2 1042 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 DEPDC5O75140 1603 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 JADE2Q9NQC1 790 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 NR1I2O75469 434 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 CYP4A11Q02928 519 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 ARID5AQ03989 594 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 SELENOOQ9BVL4 669 aa18.25■□□□□ 0.51
SMARCA4-201ENST00000344626 CCL15-CCL14A0A0B4J2E2 113 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 CCL15Q16663 113 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 APOA5Q6Q788 366 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 ADARB2Q9NS39 739 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 TPCN1Q9ULQ1 816 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 LUC7L2Q9Y383 392 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 PCDHB13Q9Y5F0 798 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 ABCC12Q96J65 1359 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 JPH2Q9BR39 696 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms