RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 GIMAP6Q6P9H5 292 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 TBC1D10CQ8IV04 446 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 TGFBRAP1Q8WUH2 860 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 NOL10Q9BSC4 688 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 CNNM2Q9H8M5 875 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 EMILIN3Q9NT22 766 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 RLFQ13129 1914 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 PRC1O43663 620 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 CNMDO75829 334 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 GDF11O95390 407 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 GJB2P29033 226 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 MAP2K5Q13163 448 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 MAPKAPK5Q8IW41 473 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 C12orf42Q96LP6 360 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 PAGR1Q9BTK6 254 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 ZDHHC9Q9Y397 364 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 PRKAB2O43741 272 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 PFKFB2O60825 505 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 BAG4O95429 457 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 EVCP57679 992 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L2Q6R6M4 530 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 CERS3Q8IU89 383 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 CCAR1Q8IX12 1150 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 CRACR2BQ8N4Y2 399 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 NECAB1Q8N987 351 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 STAG1Q8WVM7 1258 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 ZNF274Q96GC6 653 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 LRRC2Q9BYS8 371 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 CRNKL1Q9BZJ0 848 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 RNF41Q9H4P4 317 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 FLRT1Q9NZU1 646 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
HERPUD1-202ENST00000344114 ZNF236Q9UL36 1845 aa15.73■□□□□ 0.11
HERPUD1-202ENST00000344114 PDCP20941 246 aa15.73■□□□□ 0.11
HERPUD1-202ENST00000344114 KCNA4P22459 653 aa15.73■□□□□ 0.11
HERPUD1-202ENST00000344114 AKNAD1Q5T1N1 836 aa15.73■□□□□ 0.11
HERPUD1-202ENST00000344114 LLPHQ9BRT6 129 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-202ENST00000344114 TRIM34Q9BYJ4 488 aa15.73■□□□□ 0.11
HERPUD1-202ENST00000344114 KRT23Q9C075 422 aa15.73■□□□□ 0.11
HERPUD1-202ENST00000344114 SENP6Q9GZR1 1112 aaPredicted RBP15.73■□□□□ 0.11
HERPUD1-202ENST00000344114 NEDD4P46934 1319 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 STX6O43752 255 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 MSCO60682 206 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 IGHA2P01877 340 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 HOXC6P09630 235 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 ANTXR2P58335 489 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 DYNLL1P63167 89 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 APOBRQ0VD83 1088 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 STK3Q13188 491 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 LBX2Q6XYB7 198 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 LPAR1Q92633 364 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 TMEM87BQ96K49 555 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 MTA3Q9BTC8 594 aa15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 DDX20Q9UHI6 824 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-202ENST00000344114 DNAH12Q6ZR08 3092 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 SLC15A5A6NIM6 579 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L15C9J2P7 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L13C9JLJ4 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L11C9JVI0 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L18D6R9N7 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L22D6RA61 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L17D6RBQ6 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L19D6RCP7 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L20D6RJB6 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 HLA-DOAP06340 250 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 PCP11498 1178 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 PTPREP23469 700 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 CCNA1P78396 465 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 PPARAQ07869 468 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 USP17L24Q0WX57 530 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 MFSD14CQ5VZR4 134 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 TATDN1Q6P1N9 297 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 MFSD6Q6ZSS7 791 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 SDR42E1Q8WUS8 393 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 LBHD1Q9BQE6 289 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 ATP8A2Q9NTI2 1148 aa15.71■□□□□ 0.11
HERPUD1-202ENST00000344114 DNM1LO00429 736 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 GH2P01242 217 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 ZSCAN22P10073 491 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 SYT1P21579 422 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 HMGN5P82970 282 aaKnown RBP15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 CTDSPL2Q05D32 466 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 SCRN1Q12765 414 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 GRB14Q14449 540 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 ZNF697Q5TEC3 545 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 CATSPERGQ6ZRH7 1159 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 CHST3Q7LGC8 479 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 FAM161BQ96MY7 647 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 KIF3AQ9Y496 699 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 A0A0G2JMZ2 1700 aa15.7■□□□□ 0.1
HERPUD1-202ENST00000344114 B4E1Z4 1266 aa15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 SH2B2O14492 632 aaPredicted RBP15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 SKOR2Q2VWA4 1001 aaPredicted RBP15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 CYB5R4Q7L1T6 521 aa15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 SMARCC2Q8TAQ2 1214 aa15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 NPLOC4Q8TAT6 608 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms