RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 DDIT3P35638 169 aa8.63□□□□□ -1.03
ZNF540-202ENST00000343599 CYP26C1Q6V0L0 522 aa8.63□□□□□ -1.03
ZNF540-202ENST00000343599 EDC3Q96F86 508 aaKnown RBP8.63□□□□□ -1.03
ZNF540-202ENST00000343599 VTA1Q9NP79 307 aa8.63□□□□□ -1.03
ZNF540-202ENST00000343599 CXCL10P02778 98 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 BTNL9Q6UXG8 535 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 SLC17A8Q8NDX2 589 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 TRIB2Q92519 343 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 UBE2OQ9C0C9 1292 aaKnown RBP8.62□□□□□ -1.03
ZNF540-202ENST00000343599 APAF1O14727 1248 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 SEC24BO95487 1268 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 CLTBP09497 229 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 AKR1A1P14550 325 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 PIP4K2AP48426 406 aaPredicted RBP8.62□□□□□ -1.03
ZNF540-202ENST00000343599 CACNB2Q08289 660 aaPredicted RBP8.62□□□□□ -1.03
ZNF540-202ENST00000343599 LEXMQ3ZCV2 418 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 RNF180Q86T96 592 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 ASB2Q96Q27 587 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 MPHOSPH6Q99547 160 aaKnown RBP8.62□□□□□ -1.03
ZNF540-202ENST00000343599 BICC1Q9H694 974 aaKnown RBP8.62□□□□□ -1.03
ZNF540-202ENST00000343599 CTNNA3Q9UI47 895 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 AOX1Q06278 1338 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.62□□□□□ -1.03
ZNF540-202ENST00000343599 SUPT20HL2P0C7V6 817 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 UBE3CQ15386 1083 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 ZNF662Q6ZS27 426 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 KRI1Q8N9T8 703 aaKnown RBP8.62□□□□□ -1.03
ZNF540-202ENST00000343599 GMCL1Q96IK5 515 aa8.62□□□□□ -1.03
ZNF540-202ENST00000343599 SLFN14P0C7P3 912 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 KLRK1P26718 216 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 HOXC8P31273 242 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 COG2Q14746 738 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 EPHA10Q5JZY3 1008 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 IQSEC1Q6DN90 963 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 NFRKBQ6P4R8 1299 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 TMEM199Q8N511 208 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.61□□□□□ -1.03
ZNF540-202ENST00000343599 THEGQ9P2T0 379 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 FRMPD4Q14CM0 1322 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 ASB14A6NK59 587 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 C5orf67F2Z3F1 127 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 PLIN1O60240 522 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 ZFYP08048 801 aaPredicted RBP8.61□□□□□ -1.03
ZNF540-202ENST00000343599 POU2F2P09086 479 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 RTP1P59025 263 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 FPGSQ05932 587 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 SPATA5Q8NB90 893 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 CAGE1Q8TC20 777 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 COL25A1Q9BXS0 654 aaPredicted RBP8.61□□□□□ -1.03
ZNF540-202ENST00000343599 SEMA4AQ9H3S1 761 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 TSKSQ9UJT2 592 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 ANAPC4Q9UJX5 808 aa8.61□□□□□ -1.03
ZNF540-202ENST00000343599 TRIM6-TRIM34B2RNG4 842 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 STAM2O75886 525 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 CWF19L2Q2TBE0 894 aaKnown RBP8.6□□□□□ -1.03
ZNF540-202ENST00000343599 KCNV1Q6PIU1 500 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 MOB2Q70IA6 237 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 TRIM34Q9BYJ4 488 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 OGFRQ9NZT2 677 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 GABRQQ9UN88 632 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 FLT1P17948 1338 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 ALX1Q15699 326 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 FAM26DQ5JW98 314 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 MICAL3Q7RTP6 2002 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 VPS37DQ86XT2 251 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 CDAN1Q8IWY9 1227 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 CEP120Q8N960 986 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 IER2Q9BTL4 223 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 KIAA1522Q9P206 1035 aaPredicted RBP8.6□□□□□ -1.03
ZNF540-202ENST00000343599 U3KPZ7 1027 aaPredicted RBP8.6□□□□□ -1.03
ZNF540-202ENST00000343599 BTDP43251 543 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 MCM6Q14566 821 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 C16orf86Q6ZW13 317 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 TSPYL6Q8N831 410 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 ANKRD7Q92527 254 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 ANKS1AQ92625 1134 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 KATNBL1Q9H079 304 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 VEZTQ9HBM0 779 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 CALCOCO1Q9P1Z2 691 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 FEM1BQ9UK73 627 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 STK24Q9Y6E0 443 aa8.6□□□□□ -1.03
ZNF540-202ENST00000343599 RB1P06400 928 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 ZNF865P0CJ78 1059 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-202ENST00000343599 BCAMP50895 628 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 ATP8B2P98198 1209 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 CBX2Q14781 532 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-202ENST00000343599 C20orf194Q5TEA3 1177 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 DPF3Q92784 378 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 ARPP21Q9UBL0 812 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-202ENST00000343599 FAM184BQ9ULE4 1060 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 FAM177BA6PVY3 158 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 XRRA1Q6P2D8 792 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 G2E3Q7L622 706 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 PDCL2Q8N4E4 241 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 DEFB123Q8N688 67 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 APBB2Q92870 758 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 CCDC97Q96F63 343 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms