RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 WDR46O15213 610 aaKnown RBP21.9■■□□□ 1.1
CDHR4-201ENST00000343366 EXOSC10Q01780 885 aaKnown RBP21.9■■□□□ 1.1
CDHR4-201ENST00000343366 TMEM67Q5HYA8 995 aa21.9■■□□□ 1.1
CDHR4-201ENST00000343366 RCSD1Q6JBY9 416 aa21.9■■□□□ 1.1
CDHR4-201ENST00000343366 IGDCC4Q8TDY8 1250 aa21.9■■□□□ 1.1
CDHR4-201ENST00000343366 DIS3LQ8TF46 1054 aaKnown RBP21.9■■□□□ 1.1
CDHR4-201ENST00000343366 PAWRQ96IZ0 340 aaKnown RBP21.9■■□□□ 1.1
CDHR4-201ENST00000343366 ZKSCAN3Q9BRR0 538 aa21.9■■□□□ 1.1
CDHR4-201ENST00000343366 PNMA3Q9UL41 463 aa21.9■■□□□ 1.1
CDHR4-201ENST00000343366 F5H6K3 240 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 NMT2O60551 498 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 RPS6KB1P23443 525 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 HOXA7P31268 230 aaPredicted RBP21.89■■□□□ 1.09
CDHR4-201ENST00000343366 FGD1P98174 961 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 KLRC3Q07444 240 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 SEC23AQ15436 765 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 GADL1Q6ZQY3 521 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 TMEM47Q9BQJ4 181 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 EMILIN3Q9NT22 766 aa21.89■■□□□ 1.09
CDHR4-201ENST00000343366 TFRCP02786 760 aaKnown RBP21.88■■□□□ 1.09
CDHR4-201ENST00000343366 ANTXR2P58335 489 aa21.88■■□□□ 1.09
CDHR4-201ENST00000343366 CLEC10AQ8IUN9 316 aa21.88■■□□□ 1.09
CDHR4-201ENST00000343366 GMCL1Q96IK5 515 aa21.88■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L15C9J2P7 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L13C9JLJ4 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L11C9JVI0 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L18D6R9N7 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L22D6RA61 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L17D6RBQ6 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L19D6RCP7 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L20D6RJB6 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 TNPO2O14787 897 aaKnown RBP21.87■■□□□ 1.09
CDHR4-201ENST00000343366 USP17L24Q0WX57 530 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 SYNE3Q6ZMZ3 975 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 SGMS1Q86VZ5 419 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 PNMA1Q8ND90 353 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 GTF3C2Q8WUA4 911 aaPredicted RBP21.87■■□□□ 1.09
CDHR4-201ENST00000343366 DCAF4Q8WV16 495 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 MAP3K14Q99558 947 aa21.87■■□□□ 1.09
CDHR4-201ENST00000343366 CCDC69A6NI79 296 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 SH2B2O14492 632 aaPredicted RBP21.86■■□□□ 1.09
CDHR4-201ENST00000343366 CALM1P0DP23 149 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 CALM2P0DP24 149 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 CALM3P0DP25 149 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 VCAM1P19320 739 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 ANKRD1Q15327 319 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 ZYXQ15942 572 aaKnown RBP21.86■■□□□ 1.09
CDHR4-201ENST00000343366 LRIT3Q3SXY7 679 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 SLFN13Q68D06 897 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 NECAB2Q7Z6G3 386 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 CATIPQ7Z7H3 387 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 ANKLE1Q8NAG6 615 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 TBC1D32Q96NH3 1257 aa21.86■■□□□ 1.09
CDHR4-201ENST00000343366 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.86■■□□□ 1.09
CDHR4-201ENST00000343366 ALDH8A1Q9H2A2 487 aaPredicted RBP21.86■■□□□ 1.09
CDHR4-201ENST00000343366 SPTBN5Q9NRC6 3674 aaKnown RBP21.85■■□□□ 1.09
CDHR4-201ENST00000343366 RAD21O60216 631 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 PLA2G6O60733 806 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 SLC1A4P43007 532 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 RCAN1P53805 252 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 FAM110CQ1W6H9 321 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 GPATCH4Q5T3I0 446 aaKnown RBP21.85■■□□□ 1.09
CDHR4-201ENST00000343366 NFXL1Q6ZNB6 911 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 CHST3Q7LGC8 479 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 LRRC47Q8N1G4 583 aaKnown RBP21.85■■□□□ 1.09
CDHR4-201ENST00000343366 AGXT2Q9BYV1 514 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 LY9Q9HBG7 655 aa21.85■■□□□ 1.09
CDHR4-201ENST00000343366 DDAH1O94760 285 aa21.84■■□□□ 1.09
CDHR4-201ENST00000343366 NDUFB10O96000 172 aa21.84■■□□□ 1.09
CDHR4-201ENST00000343366 IRX3P78415 501 aaPredicted RBP21.84■■□□□ 1.09
CDHR4-201ENST00000343366 PPP2R5BQ15173 497 aa21.84■■□□□ 1.09
CDHR4-201ENST00000343366 CATSPERGQ6ZRH7 1159 aa21.84■■□□□ 1.09
CDHR4-201ENST00000343366 HOXC10Q9NYD6 342 aa21.84■■□□□ 1.09
CDHR4-201ENST00000343366 STXBP5LQ9Y2K9 1186 aa21.84■■□□□ 1.09
CDHR4-201ENST00000343366 SNHG28P0DPA3 235 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 FDX1P10109 184 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 BMP3P12645 472 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 TREML2Q5T2D2 321 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 FAM160B2Q86V87 743 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 ANKRD13CQ8N6S4 541 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 CHURC1Q8WUH1 139 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 RPAP3Q9H6T3 665 aaPredicted RBP21.83■■□□□ 1.09
CDHR4-201ENST00000343366 PDRG1Q9NUG6 133 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 FEM1BQ9UK73 627 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 GJD2Q9UKL4 321 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 SLC12A7Q9Y666 1083 aa21.83■■□□□ 1.09
CDHR4-201ENST00000343366 PRUNE2Q8WUY3 3088 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 PDHBP11177 359 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 KIF5BP33176 963 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 COG2Q14746 738 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 RABEP1Q15276 862 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 Q6ZUG5 572 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 SPICE1Q8N0Z3 855 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 DEFB123Q8N688 67 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 SMCR8Q8TEV9 937 aaPredicted RBP21.82■■□□□ 1.08
CDHR4-201ENST00000343366 TANGO6Q9C0B7 1094 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 MTMR10Q9NXD2 777 aa21.82■■□□□ 1.08
CDHR4-201ENST00000343366 HMGCRP04035 888 aa21.81■■□□□ 1.08
CDHR4-201ENST00000343366 GCLCP48506 637 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms