RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 FXR2P51116 673 aaKnown RBP eCLIP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 RPS8P62241 208 aaKnown RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 CEBPZQ03701 1054 aaKnown RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 TRDNQ13061 729 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 PDCL2Q8N4E4 241 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 NEDD1Q8NHV4 660 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 WDR24Q96S15 920 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 PYM1Q9BRP8 204 aaKnown RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 ANKZF1Q9H8Y5 726 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 SAMSN1Q9NSI8 373 aaKnown RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 POLR2DO15514 142 aaKnown RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 CAPN2P17655 700 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 WWC2Q6AWC2 1192 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 ARHGEF1Q92888 912 aaKnown RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 RAI14Q9P0K7 980 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 SSC5DA1L4H1 1573 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 CYP3A7-CYP3A51PA0A087WV96 503 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 TEX33O43247 280 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 NMT2O60551 498 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 SLU7O95391 586 aaKnown RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 CYP3A7P24462 503 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 C16orf45Q96MC5 204 aaPredicted RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
CFAP54-201ENST00000342887 DEFB129Q9H1M3 183 aa9.23□□□□□ -0.93
CFAP54-201ENST00000342887 SMCHD1A6NHR9 2005 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 SASH3O75995 380 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 TBC1D8O95759 1140 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 DNTTIP2Q5QJE6 756 aaKnown RBP9.22□□□□□ -0.93
CFAP54-201ENST00000342887 PPP1R18Q6NYC8 613 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 SAMD1Q6SPF0 538 aaPredicted RBP9.22□□□□□ -0.93
CFAP54-201ENST00000342887 MYO1AQ9UBC5 1043 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 OTOFQ9HC10 1997 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 A0A0U1RQJ8 604 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 CYP2D6P10635 497 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 PMS1P54277 932 aaKnown RBP9.22□□□□□ -0.93
CFAP54-201ENST00000342887 GHRHRQ02643 423 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 ITIH3Q06033 890 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 CCDC178Q5BJE1 867 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 GRAMD1CQ8IYS0 662 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 ATRIPQ8WXE1 791 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 CRAMP1Q96RY5 1269 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 LZTS2Q9BRK4 669 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 EHD4Q9H223 541 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 DISC1Q9NRI5 854 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 SYNPO2Q9UMS6 1093 aa9.22□□□□□ -0.93
CFAP54-201ENST00000342887 POLRMTO00411 1230 aaKnown RBP9.21□□□□□ -0.93
CFAP54-201ENST00000342887 PSMD14O00487 310 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 PTPN14Q15678 1187 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 PAPD7Q5XG87 772 aaKnown RBP9.21□□□□□ -0.93
CFAP54-201ENST00000342887 RAB11FIP4Q86YS3 637 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 AK8Q96MA6 479 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 BLOC1S4Q9NUP1 217 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 PGAP2Q9UHJ9 254 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 SIK3Q9Y2K2 1263 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 NFE2L3Q9Y4A8 694 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 GOLGA6L9A6NEM1 432 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 CCP110O43303 1012 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 PPP1R11O60927 126 aaPredicted RBP9.21□□□□□ -0.93
CFAP54-201ENST00000342887 CLSTN1O94985 981 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 FXR1P51114 621 aaKnown RBP eCLIP9.21□□□□□ -0.93
CFAP54-201ENST00000342887 UBASH3AP57075 661 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 SPIRE1Q08AE8 756 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 TUBB2AQ13885 445 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 TCP11X2Q5H9J9 407 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 TTC38Q5R3I4 469 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 SYNE3Q6ZMZ3 975 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 TMC6Q7Z403 805 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 ERGIC2Q96RQ1 377 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 TUBB2BQ9BVA1 445 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 VPS54Q9P1Q0 977 aa9.21□□□□□ -0.93
CFAP54-201ENST00000342887 TRIM75PA6NK02 468 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 GOLGA6L19H0YKK7 550 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 NKRFO15226 690 aaKnown RBP eCLIP9.21□□□□□ -0.94
CFAP54-201ENST00000342887 SRGNP10124 158 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 GYS1P13807 737 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 CENPPQ6IPU0 288 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 STAG2Q8N3U4 1231 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 MKL1Q969V6 931 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 AKT1S1Q96B36 256 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 CAPN11Q9UMQ6 739 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 MYH11P35749 1972 aa9.21□□□□□ -0.94
CFAP54-201ENST00000342887 GOLGA6L4A6NEF3 574 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 USP17L12C9JPN9 530 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 USP17L21D6R901 530 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 PTGDRQ13258 359 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 KRT31Q15323 416 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 PRR5LQ6MZQ0 368 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 WDR93Q6P2C0 686 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 TRAPPC11Q7Z392 1133 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 MIGA1Q8NAN2 632 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 CNNM3Q8NE01 707 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 ABHD10Q9NUJ1 306 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 COL4A4P53420 1690 aaPredicted RBP9.2□□□□□ -0.94
CFAP54-201ENST00000342887 PFASO15067 1338 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 RPS6KA5O75582 802 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 HIBADHP31937 336 aaKnown RBP9.2□□□□□ -0.94
CFAP54-201ENST00000342887 CLCN6P51797 869 aa9.2□□□□□ -0.94
CFAP54-201ENST00000342887 SH3RF3Q8TEJ3 882 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms