RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CCDC51Q96ER9 411 aa13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 REREQ9P2R6 1566 aa13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 TRIM66O15016 1216 aa13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 INPP5BP32019 993 aa13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 RASSF7Q02833 373 aa13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 DYNLL2Q96FJ2 89 aa13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 SCLT1Q96NL6 688 aa13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 CHP1Q99653 195 aa13.84□□□□□ -0.19
SNRNP48-201ENST00000342415 TBCAO75347 108 aaKnown RBP13.83□□□□□ -0.19
SNRNP48-201ENST00000342415 DNM2P50570 870 aa13.83□□□□□ -0.19
SNRNP48-201ENST00000342415 CNNM4Q6P4Q7 775 aa13.83□□□□□ -0.19
SNRNP48-201ENST00000342415 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.19
SNRNP48-201ENST00000342415 CCDC114Q96M63 670 aa13.83□□□□□ -0.19
SNRNP48-201ENST00000342415 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.19
SNRNP48-201ENST00000342415 FXR1P51114 621 aaKnown RBP eCLIP13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 PARP3Q9Y6F1 533 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 FRMPD2Q68DX3 1309 aaPredicted RBP13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 MYO1CO00159 1063 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 CYP2D6P10635 497 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 RAD9BQ6WBX8 426 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 RBM43Q6ZSC3 357 aaKnown RBP13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 TC2NQ8N9U0 490 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 RIN2Q8WYP3 895 aaPredicted RBP13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 NOX5Q96PH1 765 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 ANKRD62A6NC57 917 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 KLRF2D3W0D1 207 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 VSNL1P62760 191 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 E2F4Q16254 413 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 TPTE2Q6XPS3 522 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 KSR1Q8IVT5 923 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 BPIFA3Q9BQP9 254 aa13.83□□□□□ -0.2
SNRNP48-201ENST00000342415 USP17L8P0C7I0 530 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 TUBB2AQ13885 445 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 ILDR1Q86SU0 546 aaPredicted RBP13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 TUBB2BQ9BVA1 445 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 ATG3Q9NT62 314 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 GSG1L2A8MUP6 293 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 EHHADHQ08426 723 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 KLHL30Q0D2K2 578 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 SMIM5Q71RC9 77 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 UHMK1Q8TAS1 419 aaKnown RBP13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 SMCR8Q8TEV9 937 aaPredicted RBP13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 SELENOOQ9BVL4 669 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 MRFAP1Q9Y605 127 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 ARHGEF28Q8N1W1 1705 aaKnown RBP13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 GUCY2DQ02846 1103 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 LLGL1Q15334 1064 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 SLC9C1Q4G0N8 1177 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 SUSD4Q5VX71 490 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 NAA35Q5VZE5 725 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 MAEAQ7L5Y9 396 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 PAIP2Q9BPZ3 127 aaKnown RBP13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 PKD2L1Q9P0L9 805 aa13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.82□□□□□ -0.2
SNRNP48-201ENST00000342415 GNPATO15228 680 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 SEPT7Q16181 437 aaKnown RBP13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 CALCRLQ16602 461 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 VWDEQ8N2E2 1590 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 CHMP2AO43633 222 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 N4BP1O75113 896 aaKnown RBP13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 MOCS3O95396 460 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 PRCPP42785 496 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 PLA2G4AP47712 749 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 RPS8P62241 208 aaKnown RBP13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 UBE4AQ14139 1066 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 PPP2R5BQ15173 497 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 CCDC121Q6ZUS5 278 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 RDH13Q8NBN7 331 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 FAM71BQ8TC56 605 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 IGDCC4Q8TDY8 1250 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 TTC26A0AVF1 554 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 FAM182BQ5T319 152 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 REXO1Q8N1G1 1221 aaKnown RBP13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 NUP58Q9BVL2 599 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 ABHD10Q9NUJ1 306 aa13.81□□□□□ -0.2
SNRNP48-201ENST00000342415 DIP2CQ9Y2E4 1556 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 GJC1P36383 396 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 POLR2FP61218 127 aaKnown RBP13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 TCP11X2Q5H9J9 407 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 KRT26Q7Z3Y9 468 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 FOXP4Q8IVH2 680 aaPredicted RBP13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 ENAHQ8N8S7 591 aaPredicted RBP13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 TSGA10Q9BZW7 698 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 PPLO60437 1756 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 E7EVH7 732 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 PARP10Q53GL7 1025 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 LRRC47Q8N1G4 583 aaKnown RBP13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 PPM1EQ8WY54 764 aa13.8□□□□□ -0.2
SNRNP48-201ENST00000342415 HPS3Q969F9 1004 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms