RNA–Protein interactions for RNA: ENST00000341918.4

CXCL17-201, Transcript of C-X-C motif chemokine ligand 17, humanhuman

TSL 3

Gene CXCL17, Length 748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL17-201ENST00000341918 ZKSCAN2Q63HK3 967 aa13.74□□□□□ -0.21
CXCL17-201ENST00000341918 PSRC1Q6PGN9 363 aaPredicted RBP13.74□□□□□ -0.21
CXCL17-201ENST00000341918 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
CXCL17-201ENST00000341918 LCORLQ8N3X6 602 aa13.74□□□□□ -0.21
CXCL17-201ENST00000341918 ADAMTS19Q8TE59 1207 aa13.74□□□□□ -0.21
CXCL17-201ENST00000341918 FRAT1Q92837 279 aaPredicted RBP13.74□□□□□ -0.21
CXCL17-201ENST00000341918 DYNLL2Q96FJ2 89 aa13.74□□□□□ -0.21
CXCL17-201ENST00000341918 UPF3AQ9H1J1 476 aaKnown RBP13.74□□□□□ -0.21
CXCL17-201ENST00000341918 ATP8A2Q9NTI2 1148 aa13.74□□□□□ -0.21
CXCL17-201ENST00000341918 FBXO28Q9NVF7 368 aa13.74□□□□□ -0.21
CXCL17-201ENST00000341918 FAM184BQ9ULE4 1060 aa13.74□□□□□ -0.21
CXCL17-201ENST00000341918 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
CXCL17-201ENST00000341918 ZNF532Q9HCE3 1301 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 ABCB7O75027 752 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 PLA2G5P39877 138 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 MRPS5P82675 430 aaKnown RBP13.73□□□□□ -0.21
CXCL17-201ENST00000341918 C12orf60Q5U649 245 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 C16orf86Q6ZW13 317 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 AACSQ86V21 672 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 ERC1Q8IUD2 1116 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 TEX13BQ9BXU2 312 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 PRDM12Q9H4Q4 367 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 C1orf115Q9H7X2 142 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 KANSL2Q9H9L4 492 aa13.73□□□□□ -0.21
CXCL17-201ENST00000341918 BAZ2AQ9UIF9 1905 aaKnown RBP13.72□□□□□ -0.21
CXCL17-201ENST00000341918 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 MYADML2A6NDP7 307 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 EEF2P13639 858 aaKnown RBP13.72□□□□□ -0.21
CXCL17-201ENST00000341918 CSF2RAP15509 400 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 CDK8P49336 464 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 GJA9P57773 515 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 RAB30Q15771 203 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 CEP85Q6P2H3 762 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 FAM126BQ8IXS8 530 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 TMEM199Q8N511 208 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 PCSK9Q8NBP7 692 aaKnown RBP13.72□□□□□ -0.21
CXCL17-201ENST00000341918 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
CXCL17-201ENST00000341918 MCM3APO60318 1980 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 A0A0U1RQG5 324 aaPredicted RBP13.71□□□□□ -0.21
CXCL17-201ENST00000341918 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 ARVCFO00192 962 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 CTAGE5O15320 804 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 ADCY6O43306 1168 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 CD4P01730 458 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 FGD4Q96M96 766 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 UHRF1Q96T88 793 aaPredicted RBP13.71□□□□□ -0.21
CXCL17-201ENST00000341918 GOPCQ9HD26 462 aa13.71□□□□□ -0.21
CXCL17-201ENST00000341918 PRRC2BQ5JSZ5 2229 aaKnown RBP13.7□□□□□ -0.22
CXCL17-201ENST00000341918 SMIM22K7EJ46 135 aa13.7□□□□□ -0.22
CXCL17-201ENST00000341918 ASGR1P07306 291 aa13.7□□□□□ -0.22
CXCL17-201ENST00000341918 FAM83BQ5T0W9 1011 aa13.7□□□□□ -0.22
CXCL17-201ENST00000341918 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.7□□□□□ -0.22
CXCL17-201ENST00000341918 KATNBL1Q9H079 304 aa13.7□□□□□ -0.22
CXCL17-201ENST00000341918 ARMT1Q9H993 441 aa13.7□□□□□ -0.22
CXCL17-201ENST00000341918 IL23AQ9NPF7 189 aa13.7□□□□□ -0.22
CXCL17-201ENST00000341918 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
CXCL17-201ENST00000341918 RAPGEFL1Q9UHV5 662 aa13.7□□□□□ -0.22
CXCL17-201ENST00000341918 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
CXCL17-201ENST00000341918 PRKAB2O43741 272 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 ADD2P35612 726 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 ACVR2BQ13705 512 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 CCDC129Q6ZRS4 1044 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 SLF1Q9BQI6 1058 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 ABHD16BQ9H3Z7 469 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 SPC25Q9HBM1 224 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.69□□□□□ -0.22
CXCL17-201ENST00000341918 MSRAQ9UJ68 235 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
CXCL17-201ENST00000341918 EXOC6BQ9Y2D4 811 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 BRWD1Q9NSI6 2320 aa13.69□□□□□ -0.22
CXCL17-201ENST00000341918 TRANK1O15050 2925 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 GBF1Q92538 1859 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 CYP2D7A0A087X1C5 515 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 USP17L21D6R901 530 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 GOLIM4O00461 696 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
CXCL17-201ENST00000341918 C6orf222P0C671 652 aaPredicted RBP13.68□□□□□ -0.22
CXCL17-201ENST00000341918 RLBP1P12271 317 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 BMP1P13497 986 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
CXCL17-201ENST00000341918 CCDC144BQ3MJ40 725 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 SNRNP48Q6IEG0 339 aaKnown RBP13.68□□□□□ -0.22
CXCL17-201ENST00000341918 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
CXCL17-201ENST00000341918 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
CXCL17-201ENST00000341918 MTIF3Q9H2K0 278 aaKnown RBP13.68□□□□□ -0.22
CXCL17-201ENST00000341918 YBX2Q9Y2T7 364 aaKnown RBP13.68□□□□□ -0.22
CXCL17-201ENST00000341918 MBD4O95243 580 aa13.67□□□□□ -0.22
CXCL17-201ENST00000341918 ACRP10323 421 aa13.67□□□□□ -0.22
CXCL17-201ENST00000341918 POU3F3P20264 500 aaPredicted RBP13.67□□□□□ -0.22
CXCL17-201ENST00000341918 GNASQ5JWF2 1037 aa13.67□□□□□ -0.22
CXCL17-201ENST00000341918 PRPF38AQ8NAV1 312 aaKnown RBP13.67□□□□□ -0.22
CXCL17-201ENST00000341918 PPM1EQ8WY54 764 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms