RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 KLRF2D3W0D1 207 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 TRIM37O94972 964 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 NR1I3Q14994 352 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 NEDD1Q8NHV4 660 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 TMEM60Q9H2L4 133 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 NRDCO43847 1150 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 COBLO75128 1261 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 KIF20AO95235 890 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 SLC27A3Q5K4L6 730 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 SPATA1Q5VX52 437 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 ARL6IP4Q66PJ3 421 aaKnown RBP22.79■■□□□ 1.24
SPG7-202ENST00000341316 CERS3Q8IU89 383 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 CRAMP1Q96RY5 1269 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 L2HGDHQ9H9P8 463 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 SYNRGQ9UMZ2 1314 aa22.79■■□□□ 1.24
SPG7-202ENST00000341316 KLRG2A4D1S0 409 aaPredicted RBP22.78■■□□□ 1.24
SPG7-202ENST00000341316 INF2Q27J81 1249 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 SPECC1LQ69YQ0 1117 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 USP17L2Q6R6M4 530 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 DAGLBQ8NCG7 672 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 CEP95Q96GE4 821 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 CCDC194A0A1B0GVG4 234 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 GTF2IP78347 998 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 PROM2Q8N271 834 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 TC2NQ8N9U0 490 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 ZNF287Q9HBT7 754 aa22.78■■□□□ 1.24
SPG7-202ENST00000341316 A0A1B0GTH6 734 aa22.77■■□□□ 1.24
SPG7-202ENST00000341316 TEX33O43247 280 aa22.77■■□□□ 1.24
SPG7-202ENST00000341316 LONP1P36776 959 aaKnown RBP22.77■■□□□ 1.24
SPG7-202ENST00000341316 ADKP55263 362 aaKnown RBP22.77■■□□□ 1.24
SPG7-202ENST00000341316 KARSQ15046 597 aaKnown RBP22.77■■□□□ 1.24
SPG7-202ENST00000341316 CT47A1Q5JQC4 288 aaPredicted RBP22.77■■□□□ 1.24
SPG7-202ENST00000341316 QTRT2Q9H974 415 aaKnown RBP22.77■■□□□ 1.24
SPG7-202ENST00000341316 DAGLAQ9Y4D2 1042 aa22.77■■□□□ 1.24
SPG7-202ENST00000341316 LTBP1Q14766 1721 aa22.77■■□□□ 1.24
SPG7-202ENST00000341316 PP2D1A8MPX8 630 aa22.77■■□□□ 1.23
SPG7-202ENST00000341316 RIMBP2O15034 1052 aa22.77■■□□□ 1.23
SPG7-202ENST00000341316 PLCG2P16885 1265 aa22.77■■□□□ 1.23
SPG7-202ENST00000341316 CDKAL1Q5VV42 579 aa22.77■■□□□ 1.23
SPG7-202ENST00000341316 LRRN4CLQ8ND94 238 aa22.77■■□□□ 1.23
SPG7-202ENST00000341316 GABPB1Q06547 395 aaPredicted RBP22.76■■□□□ 1.23
SPG7-202ENST00000341316 CCDC148Q8NFR7 591 aa22.76■■□□□ 1.23
SPG7-202ENST00000341316 TBC1D22AQ8WUA7 517 aa22.76■■□□□ 1.23
SPG7-202ENST00000341316 SPZ1Q9BXG8 430 aa22.76■■□□□ 1.23
SPG7-202ENST00000341316 KRT222Q8N1A0 295 aa22.75■■□□□ 1.23
SPG7-202ENST00000341316 CTNND2Q9UQB3 1225 aa22.75■■□□□ 1.23
SPG7-202ENST00000341316 PPEF1O14829 653 aaPredicted RBP22.75■■□□□ 1.23
SPG7-202ENST00000341316 GTPBP6O43824 516 aaPredicted RBP22.75■■□□□ 1.23
SPG7-202ENST00000341316 CCDC93Q567U6 631 aa22.75■■□□□ 1.23
SPG7-202ENST00000341316 REXO1L1PQ8IX06 675 aa22.75■■□□□ 1.23
SPG7-202ENST00000341316 LZTS2Q9BRK4 669 aa22.75■■□□□ 1.23
SPG7-202ENST00000341316 PARP1P09874 1014 aaKnown RBP22.74■■□□□ 1.23
SPG7-202ENST00000341316 ERCC6LQ2NKX8 1250 aa22.74■■□□□ 1.23
SPG7-202ENST00000341316 NAALADL2Q58DX5 795 aa22.74■■□□□ 1.23
SPG7-202ENST00000341316 GALNT17Q6IS24 598 aa22.74■■□□□ 1.23
SPG7-202ENST00000341316 HOMER1Q86YM7 354 aa22.74■■□□□ 1.23
SPG7-202ENST00000341316 ZMYND12Q9H0C1 365 aa22.74■■□□□ 1.23
SPG7-202ENST00000341316 F8W031 263 aaPredicted RBP22.74■■□□□ 1.23
SPG7-202ENST00000341316 DTHD1Q6ZMT9 781 aa22.74■■□□□ 1.23
SPG7-202ENST00000341316 SLF2Q8IX21 1173 aa22.74■■□□□ 1.23
SPG7-202ENST00000341316 SP8Q8IXZ3 490 aa22.74■■□□□ 1.23
SPG7-202ENST00000341316 BAG1Q99933 345 aaPredicted RBP22.74■■□□□ 1.23
SPG7-202ENST00000341316 USP17L5A8MUK1 530 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 NOVP48745 357 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 PICALMQ13492 652 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 RRAGBQ5VZM2 374 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 CERS5Q8N5B7 392 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 PYM1Q9BRP8 204 aaKnown RBP22.73■■□□□ 1.23
SPG7-202ENST00000341316 MXD3Q9BW11 206 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 VAT1LQ9HCJ6 419 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 DISC1Q9NRI5 854 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 ADD3Q9UEY8 706 aaKnown RBP22.73■■□□□ 1.23
SPG7-202ENST00000341316 LRRC37AA6NMS7 1700 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 FANCGO15287 622 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 NAPAP54920 295 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 TRIM65Q6PJ69 517 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 ZNF771Q7L3S4 317 aaPredicted RBP22.73■■□□□ 1.23
SPG7-202ENST00000341316 LRRC15Q8TF66 581 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 FAM53CQ9NYF3 392 aa22.73■■□□□ 1.23
SPG7-202ENST00000341316 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.73■■□□□ 1.235e-8■■■■■ 26.9
SPG7-202ENST00000341316 MYH1P12882 1939 aa22.72■■□□□ 1.23
SPG7-202ENST00000341316 ARHGAP6O43182 974 aa22.72■■□□□ 1.23
SPG7-202ENST00000341316 STAT6P42226 847 aa22.72■■□□□ 1.23
SPG7-202ENST00000341316 UBA5Q9GZZ9 404 aa22.72■■□□□ 1.23
SPG7-202ENST00000341316 ZNF446Q9NWS9 450 aa22.72■■□□□ 1.23
SPG7-202ENST00000341316 ATP6V0A2Q9Y487 856 aa22.72■■□□□ 1.23
SPG7-202ENST00000341316 TUBB4AP04350 444 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 RPN1P04843 607 aaKnown RBP22.71■■□□□ 1.23
SPG7-202ENST00000341316 PBX1P40424 430 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 TXNRD1Q16881 649 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 PIGSQ96S52 555 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 DDX4Q9NQI0 724 aaKnown RBP22.71■■□□□ 1.23
SPG7-202ENST00000341316 SMCO2A6NFE2 343 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 ETF1P62495 437 aaKnown RBP22.71■■□□□ 1.23
SPG7-202ENST00000341316 KRT27Q7Z3Y8 459 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 PLIN2Q99541 437 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 DNAI1Q9UI46 699 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 GDAQ9Y2T3 454 aa22.71■■□□□ 1.23
SPG7-202ENST00000341316 CCP110O43303 1012 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 TXLNAP40222 546 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms