RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 STX8Q9UNK0 236 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 COL11A1P12107 1806 aaPredicted RBP15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 ATP2A1O14983 1001 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 FARP2O94887 1054 aaPredicted RBP15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 FCER1AP12319 257 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 BMP3P12645 472 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 PDE4AP27815 886 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 ADORA2AP29274 412 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 STAT3P40763 770 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 AKNAD1Q5T1N1 836 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 OLFML2BQ68BL8 750 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 MFSD6Q6ZSS7 791 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 REPS2Q8NFH8 660 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 STAG1Q8WVM7 1258 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 HTATIP2Q9BUP3 242 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 TEX13BQ9BXU2 312 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 CTNNA3Q9UI47 895 aa15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 ZNF214Q9UL59 606 aaPredicted RBP15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 CTDP1Q9Y5B0 961 aaPredicted RBP15.76■□□□□ 0.11
SIRPB3P-201ENST00000340424 LAMA4Q16363 1823 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 ZNF213O14771 459 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 PLA2G6O60733 806 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 ZBED4O75132 1171 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 SLC1A4P43007 532 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 OAZ1P54368 228 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 CACNB2Q08289 660 aaPredicted RBP15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 TRIM32Q13049 653 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 FAM160B2Q86V87 743 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 CHURC1Q8WUH1 139 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 RUFY2Q8WXA3 655 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 NUP88Q99567 741 aaPredicted RBP15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 IL17RBQ9NRM6 502 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 TOMM22Q9NS69 142 aa15.75■□□□□ 0.11
SIRPB3P-201ENST00000340424 MSCO60682 206 aa15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 IGHA2P01877 340 aa15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 GSPT1P15170 499 aaKnown RBP15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 STAT2P52630 851 aa15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 CCL14Q16627 93 aa15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 ESR2Q92731 530 aa15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 TTC14Q96N46 770 aa15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 SLC38A10Q9HBR0 1119 aa15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 OGDHLQ9ULD0 1010 aa15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 DIS3Q9Y2L1 958 aaKnown RBP15.74■□□□□ 0.11
SIRPB3P-201ENST00000340424 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 KCTD2Q14681 263 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 IMMTQ16891 758 aaKnown RBP15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 CCDC178Q5BJE1 867 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 SNRNP48Q6IEG0 339 aaKnown RBP15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 RCSD1Q6JBY9 416 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 NPLOC4Q8TAT6 608 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 DCAF4Q8WV16 495 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 KIFC2Q96AC6 838 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 MMP19Q99542 508 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 INCENPQ9NQS7 918 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 FBXO40Q9UH90 709 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 NRBP1Q9UHY1 535 aa15.73■□□□□ 0.11
SIRPB3P-201ENST00000340424 TOP1P11387 765 aaKnown RBP15.72■□□□□ 0.11
SIRPB3P-201ENST00000340424 HAND2P61296 217 aa15.72■□□□□ 0.11
SIRPB3P-201ENST00000340424 NECAB2Q7Z6G3 386 aa15.72■□□□□ 0.11
SIRPB3P-201ENST00000340424 NBPF3Q9H094 633 aa15.72■□□□□ 0.11
SIRPB3P-201ENST00000340424 FLRT1Q9NZU1 646 aa15.72■□□□□ 0.11
SIRPB3P-201ENST00000340424 TACC3Q9Y6A5 838 aa15.72■□□□□ 0.11
SIRPB3P-201ENST00000340424 TMEM232C9JQI7 657 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 NMT2O60551 498 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 COBLO75128 1261 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 MCCP23508 829 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 IKQ13123 557 aaPredicted RBP15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 CENPQQ7L2Z9 268 aaPredicted RBP15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 IQCA1Q86XH1 822 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 TBC1D10CQ8IV04 446 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 MSL3Q8N5Y2 521 aaKnown RBP15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 CHST13Q8NET6 341 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 MAML3Q96JK9 1138 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 CNNM2Q9H8M5 875 aa15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.11
SIRPB3P-201ENST00000340424 CCND3P30281 292 aaPredicted RBP15.7■□□□□ 0.1
SIRPB3P-201ENST00000340424 LHX8Q68G74 356 aa15.7■□□□□ 0.1
SIRPB3P-201ENST00000340424 DGKHQ86XP1 1220 aa15.7■□□□□ 0.1
SIRPB3P-201ENST00000340424 KRT23Q9C075 422 aa15.7■□□□□ 0.1
SIRPB3P-201ENST00000340424 CYBAP13498 195 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 CHMLP26374 656 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 CYP2C19P33261 490 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 MNX1P50219 401 aaPredicted RBP15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 ZNF792Q3KQV3 632 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 TKFCQ3LXA3 575 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 DPF3Q92784 378 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 DDX20Q9UHI6 824 aaKnown RBP15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 PNMA2Q9UL42 364 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 NR2E3Q9Y5X4 410 aa15.69■□□□□ 0.1
SIRPB3P-201ENST00000340424 NEDD4P46934 1319 aa15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 SEPT4O43236 478 aa15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 BTNL9Q6UXG8 535 aa15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 KCTD1Q719H9 257 aa15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 ZNF467Q7Z7K2 595 aaPredicted RBP15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms