RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 NEBLO76041 1014 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 ZFYP08048 801 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-201ENST00000339754 NR5A1Q13285 461 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 SNCBQ16143 134 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 MEA1Q16626 185 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 AMOTQ4VCS5 1084 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 HSP90AB3PQ58FF7 597 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 KIAA1328Q86T90 577 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 IRF2BP1Q8IU81 584 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 PARP9Q8IXQ6 854 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 FUKQ8N0W3 1084 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 CABLES1Q8TDN4 633 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 SGSM3Q96HU1 749 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 CENPHQ9H3R5 247 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 LUC7L2Q9Y383 392 aaKnown RBP10.51□□□□□ -0.73
NECAP1-201ENST00000339754 KIF1AQ12756 1690 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 KDM4FA0A1W2PPD8 638 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 GOLGA8AA7E2F4 631 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 FAM107AO95990 144 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 TNFRSF8P28908 595 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 IL15P40933 162 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-201ENST00000339754 APBA1Q02410 837 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 SAFBQ15424 915 aaKnown RBP eCLIP10.5□□□□□ -0.73
NECAP1-201ENST00000339754 LRRC24Q50LG9 513 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 HAUS3Q68CZ6 603 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 CYB5D1Q6P9G0 228 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 MB21D1Q8N884 522 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 PIK3R5Q8WYR1 880 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 APPBP2Q92624 585 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 RUFY1Q96T51 708 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 LY9Q9HBG7 655 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 SRRM3A6NNA2 597 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-201ENST00000339754 DNM1LO00429 736 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 KIF3CO14782 793 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 GPAA1O43292 621 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 PRLRP16471 622 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 IBSPP21815 317 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-201ENST00000339754 MDH1P40925 334 aaKnown RBP10.5□□□□□ -0.73
NECAP1-201ENST00000339754 NAIF1Q69YI7 327 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-201ENST00000339754 CADPS2Q86UW7 1296 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 SGMS1Q86VZ5 419 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 CEP57Q86XR8 500 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 FNBP4Q8N3X1 1017 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-201ENST00000339754 ZNF507Q8TCN5 953 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 OXER1Q8TDS5 423 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 TMEM87BQ96K49 555 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 STIM2Q9P246 746 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 CEP131Q9UPN4 1083 aa10.5□□□□□ -0.73
NECAP1-201ENST00000339754 SIPA1L3O60292 1781 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-201ENST00000339754 B4E1Z4 1266 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 IFNAR1P17181 557 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 SPRED3Q2MJR0 410 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 RRAGBQ5VZM2 374 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 FMNL3Q8IVF7 1028 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 CD302Q8IX05 232 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 STAMQ92783 540 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 OSBPL7Q9BZF2 842 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 ACTR5Q9H9F9 607 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-201ENST00000339754 CABP5Q9NP86 173 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 BCCIPQ9P287 314 aaKnown RBP eCLIP10.49□□□□□ -0.73
NECAP1-201ENST00000339754 TPX2Q9ULW0 747 aaKnown RBP10.49□□□□□ -0.73
NECAP1-201ENST00000339754 TBC1D2BQ9UPU7 963 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 AFDNP55196 1824 aaKnown RBP10.49□□□□□ -0.73
NECAP1-201ENST00000339754 A0A1W2PQC6 194 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 NR1D1P20393 614 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 CDR1P51861 262 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 SLC39A6Q13433 755 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 CCDC50Q8IVM0 306 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 C1orf131Q8NDD1 294 aaKnown RBP10.49□□□□□ -0.73
NECAP1-201ENST00000339754 WASF1Q92558 559 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 SYMPKQ92797 1274 aaKnown RBP10.49□□□□□ -0.73
NECAP1-201ENST00000339754 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 SLC24A3Q9HC58 644 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 VPS54Q9P1Q0 977 aa10.49□□□□□ -0.73
NECAP1-201ENST00000339754 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-201ENST00000339754 MACROD2A1Z1Q3 448 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 RASSF10A6NK89 507 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 FAM153BP0C7A2 387 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 MATR3P43243 847 aaKnown RBP eCLIP10.48□□□□□ -0.736e-7■■■■□ 26.2
NECAP1-201ENST00000339754 INHBEP58166 350 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 GRIK3Q13003 919 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 PAK1Q13153 545 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 SCARF1Q14162 830 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 FAM153CQ494X1 144 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 FKBP15Q5T1M5 1219 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 NFXL1Q6ZNB6 911 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 NELFBQ8WX92 580 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 CCDC43Q96MW1 224 aaKnown RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 TRIM6Q9C030 488 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 NHEJ1Q9H9Q4 299 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 ATP6V0A4Q9HBG4 840 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 FAM153AQ9UHL3 310 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 XDHP47989 1333 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 PHRF1Q9P1Y6 1649 aaKnown RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 C5P01031 1676 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 H7C1W4 665 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 EYA2O00167 538 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 PARP1P09874 1014 aaKnown RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 CYLC1P35663 651 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms