RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 EFHD1Q9BUP0 239 aa3.64□□□□□ -1.83
CSMD3-202ENST00000339701 KIFC3Q9BVG8 833 aa3.64□□□□□ -1.83
CSMD3-202ENST00000339701 SMARCAL1Q9NZC9 954 aa3.64□□□□□ -1.83
CSMD3-202ENST00000339701 MAP10Q9P2G4 905 aa3.64□□□□□ -1.83
CSMD3-202ENST00000339701 C5P01031 1676 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 KIAA0232Q92628 1395 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 RPAP1Q9BWH6 1393 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 E9PMD0 336 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 FLOT1O75955 427 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 GCP02774 474 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 FYB2Q5VWT5 728 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 EXOC8Q8IYI6 725 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 GPR101Q96P66 508 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 NUF2Q9BZD4 464 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 YTHDC2Q9H6S0 1430 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SYCE3A1L190 88 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 TSPY2A6NKD2 308 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 DPYSL4O14531 572 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 NDUFAB1O14561 156 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 MARCKSP29966 332 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 TSPY1Q01534 308 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 HEATR3Q7Z4Q2 680 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 BICD1Q96G01 975 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 NAPBQ9H115 298 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 FGFR1OP2Q9NVK5 253 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ZNF215Q9UL58 517 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 MYH4Q9Y623 1939 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 MINDY4BA8MYZ0 360 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 USP14P54578 494 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 CALCOCO2Q13137 446 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 PRPF4BQ13523 1007 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 MAATS1Q7Z4T9 603 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ARHGAP18Q8N392 663 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ZKSCAN4Q969J2 545 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 KIF1BPQ96EK5 621 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SYNCQ9H7C4 482 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ZNF277Q9NRM2 450 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 GLI3P10071 1580 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 DISP2A7MBM2 1401 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 CPSF1Q10570 1443 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 MEI4A8MW99 385 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 IFNA8P32881 189 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 GRPEL1Q9HAV7 217 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ANGEL1Q9UNK9 670 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SCN7AQ01118 1682 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 CTAGE9A4FU28 777 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 PSMA7O14818 248 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 CELF2O95319 508 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 GNPTABQ3T906 1256 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 BRAPQ7Z569 592 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 CALML4Q96GE6 196 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 EPS15L1Q9UBC2 864 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 CHMP2BQ9UQN3 213 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 RSPH10B2B2RC85 870 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 STX10O60499 249 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SMIM24O75264 130 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 RSPH10BP0C881 870 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 TOP1P11387 765 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 PREPLQ4J6C6 727 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 CEP57Q86XR8 500 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SMAP1Q8IYB5 467 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 RPUSD2Q8IZ73 545 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 NOX5Q96PH1 765 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SLC7A5P2Q9GIP4 190 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 TYW1Q9NV66 732 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 WDR17Q8IZU2 1322 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 M0R2C6 588 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ATP5HO75947 161 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 KRT16P08779 473 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 XRCC6P12956 609 aaKnown RBP eCLIP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 TGFB2P61812 414 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 RNF180Q86T96 592 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 DNAJC25Q9H1X3 360 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 COPRSQ9NQ92 184 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SCN4AP35499 1836 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SRGAP3O43295 1099 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 PRMT3O60678 531 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 EIF2S1P05198 315 aaKnown RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 FBXW10Q5XX13 1052 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 SDE2Q6IQ49 451 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 LRRC8BQ6P9F7 803 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ZNF449Q6P9G9 518 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 NCAPG2Q86XI2 1143 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 ENAHQ8N8S7 591 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-202ENST00000339701 LZICQ8WZA0 190 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 EXOC1Q9NV70 894 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 PHLPP1O60346 1717 aa3.63□□□□□ -1.83
CSMD3-202ENST00000339701 TNRC6CQ9HCJ0 1690 aaKnown RBP3.62□□□□□ -1.83
CSMD3-202ENST00000339701 A0A1B0GUL7 405 aa3.62□□□□□ -1.83
CSMD3-202ENST00000339701 TOMM70O94826 608 aa3.62□□□□□ -1.83
CSMD3-202ENST00000339701 MYO1EQ12965 1108 aa3.62□□□□□ -1.83
CSMD3-202ENST00000339701 CYP26C1Q6V0L0 522 aa3.62□□□□□ -1.83
CSMD3-202ENST00000339701 CCDC121Q6ZUS5 278 aa3.62□□□□□ -1.83
CSMD3-202ENST00000339701 MASTLQ96GX5 879 aa3.62□□□□□ -1.83
CSMD3-202ENST00000339701 TTF2Q9UNY4 1162 aaKnown RBP3.62□□□□□ -1.83
CSMD3-202ENST00000339701 PKD1L3Q7Z443 1732 aa3.62□□□□□ -1.83
CSMD3-202ENST00000339701 GADD45BO75293 160 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-202ENST00000339701 STK10O94804 968 aaKnown RBP3.62□□□□□ -1.83
CSMD3-202ENST00000339701 ME1P48163 572 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms