RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 SRPRBQ9Y5M8 271 aaKnown RBP12.67□□□□□ -0.38
LRP1-202ENST00000338962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
LRP1-202ENST00000338962 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 ZNF500O60304 480 aaPredicted RBP12.66□□□□□ -0.38
LRP1-202ENST00000338962 OFD1O75665 1012 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 CALML3P27482 149 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 NFIAQ12857 509 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 NPY5RQ15761 445 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 DPCR1Q3MIW9 517 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 EAPPQ56P03 285 aaPredicted RBP12.66□□□□□ -0.38
LRP1-202ENST00000338962 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
LRP1-202ENST00000338962 SPC24Q8NBT2 197 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 CNNM3Q8NE01 707 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 GGA3Q9NZ52 723 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
LRP1-202ENST00000338962 MYH1P12882 1939 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 ENTPD3O75355 529 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 TNFAIP1Q13829 316 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 EARS2Q5JPH6 523 aaKnown RBP12.66□□□□□ -0.38
LRP1-202ENST00000338962 SPECC1Q5M775 1068 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 APOBEC3FQ8IUX4 373 aaKnown RBP12.66□□□□□ -0.38
LRP1-202ENST00000338962 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 TMOD2Q9NZR1 351 aa12.66□□□□□ -0.38
LRP1-202ENST00000338962 BIN1O00499 593 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 TPM3P06753 285 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 GRIN1Q05586 938 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 LONRF3Q496Y0 759 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 KRBA2Q6ZNG9 492 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 PLA2G4DQ86XP0 818 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 DHX40Q8IX18 779 aaKnown RBP12.65□□□□□ -0.38
LRP1-202ENST00000338962 DRC7Q8IY82 874 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 TNFRSF25Q93038 417 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 DCPSQ96C86 337 aaKnown RBP12.65□□□□□ -0.38
LRP1-202ENST00000338962 CEP95Q96GE4 821 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
LRP1-202ENST00000338962 SH3GLB2Q9NR46 395 aa12.65□□□□□ -0.38
LRP1-202ENST00000338962 MORC2Q9Y6X9 1032 aaPredicted RBP12.65□□□□□ -0.38
LRP1-202ENST00000338962 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
LRP1-202ENST00000338962 TRAPPC10P48553 1259 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 ZNF75DP51815 510 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 CACNB3P54284 484 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 NLRP12P59046 1061 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 TTC38Q5R3I4 469 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 AOPEPQ8N6M6 819 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 TTC12Q9H892 705 aaPredicted RBP12.64□□□□□ -0.39
LRP1-202ENST00000338962 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 PPP2R3BQ9Y5P8 575 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 FOCADQ5VW36 1801 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
LRP1-202ENST00000338962 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
LRP1-202ENST00000338962 TNNI2P48788 182 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 PNOCQ13519 176 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 SARM1Q6SZW1 724 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 PIK3AP1Q6ZUJ8 805 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.64□□□□□ -0.39
LRP1-202ENST00000338962 CCDC148Q8NFR7 591 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 GPKOWQ92917 476 aaPredicted RBP eCLIP12.64□□□□□ -0.39
LRP1-202ENST00000338962 FERMT2Q96AC1 680 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 ZNF830Q96NB3 372 aaPredicted RBP12.64□□□□□ -0.39
LRP1-202ENST00000338962 BPIFA3Q9BQP9 254 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 CSRNP2Q9H175 543 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 SERPINB13Q9UIV8 391 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 CNTNAP1P78357 1384 aa12.64□□□□□ -0.39
LRP1-202ENST00000338962 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 KLRF2D3W0D1 207 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 POLR2DO15514 142 aaKnown RBP12.63□□□□□ -0.39
LRP1-202ENST00000338962 RASA3Q14644 834 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 HEATR3Q7Z4Q2 680 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 METTL16Q86W50 562 aaKnown RBP12.63□□□□□ -0.39
LRP1-202ENST00000338962 SULF1Q8IWU6 871 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
LRP1-202ENST00000338962 PCDHA4Q9UN74 947 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 PLIN4Q96Q06 1357 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 CYTH3O43739 400 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 GABPAQ06546 454 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 NOM1Q5C9Z4 860 aaKnown RBP12.63□□□□□ -0.39
LRP1-202ENST00000338962 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 KRT26Q7Z3Y9 468 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 ZFPM1Q8IX07 1006 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 ELOA2Q8IYF1 753 aaPredicted RBP12.63□□□□□ -0.39
LRP1-202ENST00000338962 BLIDQ8IZY5 108 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 CCDC34Q96HJ3 373 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 SWAP70Q9UH65 585 aa12.63□□□□□ -0.39
LRP1-202ENST00000338962 ADAMTSL1Q8N6G6 1762 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 ATRNL1Q5VV63 1379 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 TOMM70O94826 608 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 TPM4P67936 248 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 ZNF174Q15697 407 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 MAP1SQ66K74 1059 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms