RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 TTLL1O95922 423 aa18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 AFMP43652 599 aa18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 NOLC1Q14978 699 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 SPATA20Q8TB22 786 aa18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 RRP36Q96EU6 259 aaKnown RBP18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 XPO4Q9C0E2 1151 aaKnown RBP18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 RIOX1Q9H6W3 641 aa18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 IFNKQ9P0W0 207 aa18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 C10orf71Q711Q0 1435 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 MPHOSPH10O00566 681 aaKnown RBP18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 IKBKBO14920 756 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 HLA-DOAP06340 250 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 SLFN14P0C7P3 912 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 FKBP1AP62942 108 aaKnown RBP18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 MORC3Q14149 939 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 STAMQ92783 540 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 SMARCE1Q969G3 411 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 GPCPD1Q9NPB8 672 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 MYH4Q9Y623 1939 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 MYO3BQ8WXR4 1341 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 TPM3P06753 285 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 MYL5Q02045 173 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 FMR1Q06787 632 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 E2F4Q16254 413 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 SH3RF1Q7Z6J0 888 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 PAGE5Q96GU1 130 aa18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 HOOK1Q9UJC3 728 aaKnown RBP18.5■□□□□ 0.55
SCNN1A-202ENST00000338748 COL4A5P29400 1685 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 SMCO2A6NFE2 343 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 PPIP5K2O43314 1243 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 ATP2B2Q01814 1243 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 TTBK2Q6IQ55 1244 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 MED15Q96RN5 788 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 EHD4Q9H223 541 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 SPTLC3Q9NUV7 552 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 SEC63Q9UGP8 760 aaKnown RBP18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 SMC2O95347 1197 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 GALNT17Q6IS24 598 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 MTRQ99707 1265 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 MRIQ9BWK5 157 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 IDI2Q9BXS1 227 aa18.49■□□□□ 0.55
SCNN1A-202ENST00000338748 PP2D1A8MPX8 630 aa18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 SMTNL1A8MU46 457 aa18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 SMARCA1P28370 1054 aa18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 ZNF543Q08ER8 600 aa18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 ASPRV1Q53RT3 343 aa18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 HSP90AA4PQ58FG1 418 aa18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 TRMT44Q8IYL2 757 aaKnown RBP18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 COA7Q96BR5 231 aa18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 TDRD3Q9H7E2 651 aaKnown RBP18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 SERPINA10Q9UK55 444 aa18.48■□□□□ 0.55
SCNN1A-202ENST00000338748 HDLBPQ00341 1268 aaKnown RBP18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 KANK3Q6NY19 840 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 DPF2Q92785 391 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 FANCLQ9NW38 375 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 PPP1R11O60927 126 aaPredicted RBP18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 SLC16A2P36021 539 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 FANCCQ00597 558 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 DPYDQ12882 1025 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 ARL6IP4Q66PJ3 421 aaKnown RBP18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 PDXDC2PQ6P474 469 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 KCTD1Q719H9 257 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 ZSCAN29Q8IWY8 852 aaPredicted RBP18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 TMEM260Q9NX78 707 aa18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 R3HCC1Q9Y3T6 440 aaKnown RBP18.47■□□□□ 0.55
SCNN1A-202ENST00000338748 PRMT6Q96LA8 375 aaPredicted RBP18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 JMJD4Q9H9V9 463 aa18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 BIN2Q9UBW5 565 aaPredicted RBP18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 PTPN21Q16825 1174 aa18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 CFAP100Q494V2 611 aa18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 LRRC8AQ8IWT6 810 aa18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 SMYD4Q8IYR2 804 aaPredicted RBP18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 ADGRF4Q8IZF3 695 aa18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 BLZF1Q9H2G9 400 aa18.46■□□□□ 0.55
SCNN1A-202ENST00000338748 CD44P16070 742 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 KCNA3P22001 575 aa18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 KARSQ15046 597 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 LETM2Q2VYF4 491 aa18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 JAKMIP3Q5VZ66 844 aa18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 CCDC12Q8WUD4 166 aaPredicted RBP18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 DHX36Q9H2U1 1008 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 C6orf50Q9HD87 102 aa18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 PI4KBQ9UBF8 816 aa18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 LONP1P36776 959 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 JAG1P78504 1218 aa18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 TRIML1Q8N9V2 468 aa18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 LRRC15Q8TF66 581 aa18.45■□□□□ 0.54
SCNN1A-202ENST00000338748 GDF11O95390 407 aa18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 EEF2P13639 858 aaKnown RBP18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 DPEP1P16444 411 aa18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 GNA11P29992 359 aa18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 TPM4P67936 248 aa18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 NONOQ15233 471 aaKnown RBP eCLIP18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 CCDC96Q2M329 555 aa18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 CERKLQ49MI3 558 aaPredicted RBP18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 SOGA3Q5TF21 947 aa18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
SCNN1A-202ENST00000338748 KRT25Q7Z3Z0 450 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms