RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RXRBP28702 533 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 ZNF713Q8N859 430 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 NAA15Q9BXJ9 866 aaKnown RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 TMEM232C9JQI7 657 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 POTEJP0CG39 1038 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CETN2P41208 172 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 ETF1P62495 437 aaKnown RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 KCTD1Q719H9 257 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 USP37Q86T82 979 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 MASTLQ96GX5 879 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CARD6Q9BX69 1037 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CWC15Q9P013 229 aaKnown RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 LAD1O00515 517 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CDC25BP30305 580 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CCDC84Q86UT8 332 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 AMNQ9BXJ7 453 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CPVLQ9H3G5 476 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 ATP1A3P13637 1013 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 ASPRV1Q53RT3 343 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 DRC1Q96MC2 740 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 RPN1P04843 607 aaKnown RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CKAP4Q07065 602 aaKnown RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 CHURC1Q8WUH1 139 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 COA7Q96BR5 231 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 EEF2KMTQ96G04 330 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 SLF1Q9BQI6 1058 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 SWAP70Q9UH65 585 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 MROH7-TTC4A0A0A0MT08 1334 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 PODNQ7Z5L7 613 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 KCNJ18B7U540 433 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 MAGEA1P43355 309 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 DNM2P50570 870 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 KCNJ12Q14500 433 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 RESP18Q5W5W9 173 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 SMYD4Q8IYR2 804 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 OR8K1Q8NGG5 319 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 SAMSN1Q9NSI8 373 aaKnown RBP7.03□□□□□ -1.28
PRKDC-202ENST00000338368 PCDHA1Q9Y5I3 950 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 STX10O60499 249 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 NMT2O60551 498 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 SHC4Q6S5L8 630 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 KANSL2Q9H9L4 492 aa7.03□□□□□ -1.28
PRKDC-202ENST00000338368 SP4Q02446 784 aa7.02□□□□□ -1.28
PRKDC-202ENST00000338368 C12orf60Q5U649 245 aa7.02□□□□□ -1.28
PRKDC-202ENST00000338368 NIM1KQ8IY84 436 aa7.02□□□□□ -1.28
PRKDC-202ENST00000338368 SCLT1Q96NL6 688 aa7.02□□□□□ -1.28
PRKDC-202ENST00000338368 DHX36Q9H2U1 1008 aaKnown RBP7.02□□□□□ -1.28
PRKDC-202ENST00000338368 POLR3GO15318 223 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 PRPF4BQ13523 1007 aaKnown RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 RAPGEF1Q13905 1077 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 PTPN21Q16825 1174 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 SLC27A3Q5K4L6 730 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 ZNF772Q68DY9 489 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 DDX39AO00148 427 aaKnown RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 SLC16A2P36021 539 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 SENP2Q9HC62 589 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 BCS1LQ9Y276 419 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 PLEKHG2Q9H7P9 1386 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 PFKFB3Q16875 520 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 FBXO33Q7Z6M2 555 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 CCDC51Q96ER9 411 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 NPR1P16066 1061 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 GPSM2P81274 684 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 MYOCDQ8IZQ8 938 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 GOLGA1Q92805 767 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 GUCY1A2P33402 732 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 TUBB4BP68371 445 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 HLTFQ14527 1009 aaKnown RBP eCLIP7.02□□□□□ -1.291e-6■□□□□ 10.8
PRKDC-202ENST00000338368 FAM26FQ5R3K3 315 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 ARL6IP4Q66PJ3 421 aaKnown RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 CC2D2BQ6DHV5 1058 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 CSRNP1Q96S65 589 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 IGSF3O75054 1194 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 SP8Q8IXZ3 490 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 CENPHQ9H3R5 247 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 ARHGEF28Q8N1W1 1705 aaKnown RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 SBK1Q52WX2 424 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 FOXP4Q8IVH2 680 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 PPP2R2CQ9Y2T4 447 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 MPHOSPH6Q99547 160 aaKnown RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 TBC1D7Q9P0N9 293 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 MACROD2A1Z1Q3 448 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 CASP14P31944 242 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 LARP4BQ92615 738 aaKnown RBP7.02□□□□□ -1.29
PRKDC-202ENST00000338368 BICD1Q96G01 975 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 TCHPQ9BT92 498 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 PI4KBQ9UBF8 816 aa7.02□□□□□ -1.29
PRKDC-202ENST00000338368 ARHGEF35A5YM69 484 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 CHMP4BP1P59074 171 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 NSMFQ6X4W1 530 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 ZNF579Q8NAF0 562 aaKnown RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 TBC1D5Q92609 795 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 DDX25Q9UHL0 483 aaKnown RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 ZNF215Q9UL58 517 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 PRR16Q569H4 304 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 DCAF17Q5H9S7 520 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 KRT222Q8N1A0 295 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 STK24Q9Y6E0 443 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms