RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CTR9Q6PD62 1173 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 NUP133Q8WUM0 1156 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 HAUS7Q99871 368 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 SLF1Q9BQI6 1058 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 TEX13BQ9BXU2 312 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
CSMD2-202ENST00000338325 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
CSMD2-202ENST00000338325 MOXD2PA6NHM9 499 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 CHGBP05060 677 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 MS4A1P11836 297 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 DNAJB2P25686 324 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 SNRNP48Q6IEG0 339 aaKnown RBP13.8□□□□□ -0.2
CSMD2-202ENST00000338325 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 KLHDC9Q8NEP7 349 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 SYMPKQ92797 1274 aaKnown RBP13.8□□□□□ -0.2
CSMD2-202ENST00000338325 ARPP21Q9UBL0 812 aaPredicted RBP13.8□□□□□ -0.2
CSMD2-202ENST00000338325 FAM184BQ9ULE4 1060 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
CSMD2-202ENST00000338325 MAMDC4Q6UXC1 1216 aa13.79□□□□□ -0.2
CSMD2-202ENST00000338325 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
CSMD2-202ENST00000338325 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
CSMD2-202ENST00000338325 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.79□□□□□ -0.2
CSMD2-202ENST00000338325 ZHX1Q9UKY1 873 aaPredicted RBP13.79□□□□□ -0.2
CSMD2-202ENST00000338325 MROH7Q68CQ1 1323 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 DUSP11O75319 330 aaKnown RBP13.78□□□□□ -0.2
CSMD2-202ENST00000338325 SNAI1O95863 264 aaPredicted RBP13.78□□□□□ -0.2
CSMD2-202ENST00000338325 TIMP1P01033 207 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 CST5P28325 142 aaPredicted RBP13.78□□□□□ -0.2
CSMD2-202ENST00000338325 GRIN2CQ14957 1233 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 KCNA10Q16322 511 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 CCSAPQ6IQ19 270 aaPredicted RBP13.78□□□□□ -0.2
CSMD2-202ENST00000338325 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
CSMD2-202ENST00000338325 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
CSMD2-202ENST00000338325 PRDM6Q9NQX0 595 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 TBX21Q9UL17 535 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 RIPK3Q9Y572 518 aa13.78□□□□□ -0.2
CSMD2-202ENST00000338325 ELP1O95163 1332 aa13.77□□□□□ -0.2
CSMD2-202ENST00000338325 MYADML2A6NDP7 307 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 F5H6K3 240 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 RASA1P20936 1047 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 KLRC3Q07444 240 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 MFSD5Q6N075 450 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 PRPF38AQ8NAV1 312 aaKnown RBP13.77□□□□□ -0.21
CSMD2-202ENST00000338325 GLT1D1Q96MS3 346 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.21
CSMD2-202ENST00000338325 ZBTB40Q9NUA8 1239 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 NYAP2Q9P242 653 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 GBF1Q92538 1859 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 LRRC37A2A6NM11 1700 aa13.77□□□□□ -0.21
CSMD2-202ENST00000338325 ATP2A1O14983 1001 aa13.76□□□□□ -0.21
CSMD2-202ENST00000338325 NDUFB10O96000 172 aa13.76□□□□□ -0.21
CSMD2-202ENST00000338325 PPIGQ13427 754 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSMD2-202ENST00000338325 ACVR2BQ13705 512 aa13.76□□□□□ -0.21
CSMD2-202ENST00000338325 SBK1Q52WX2 424 aa13.76□□□□□ -0.21
CSMD2-202ENST00000338325 CCDC174Q6PII3 467 aa13.76□□□□□ -0.21
CSMD2-202ENST00000338325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSMD2-202ENST00000338325 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
CSMD2-202ENST00000338325 PCSK9Q8NBP7 692 aaKnown RBP13.76□□□□□ -0.21
CSMD2-202ENST00000338325 TIFAQ96CG3 184 aa13.76□□□□□ -0.21
CSMD2-202ENST00000338325 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
CSMD2-202ENST00000338325 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
CSMD2-202ENST00000338325 CTDP1Q9Y5B0 961 aaPredicted RBP13.76□□□□□ -0.21
CSMD2-202ENST00000338325 ADCY6O43306 1168 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 ZBED4O75132 1171 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 C6orf222P0C671 652 aaPredicted RBP13.75□□□□□ -0.21
CSMD2-202ENST00000338325 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 CDK7P50613 346 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 TJAP1Q5JTD0 557 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 CPXCR1Q8N123 301 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
CSMD2-202ENST00000338325 ABHD16BQ9H3Z7 469 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 MKNK2Q9HBH9 465 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 SPC25Q9HBM1 224 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 COG6Q9Y2V7 657 aa13.75□□□□□ -0.21
CSMD2-202ENST00000338325 A0A0U1RQG5 324 aaPredicted RBP13.74□□□□□ -0.21
CSMD2-202ENST00000338325 ASGR1P07306 291 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 GJA9P57773 515 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
CSMD2-202ENST00000338325 TMEM240Q5SV17 173 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 GIMAP6Q6P9H5 292 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 ANKRD35Q8N283 1001 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 KIFC2Q96AC6 838 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 FGD4Q96M96 766 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 STRBPQ96SI9 672 aaKnown RBP13.74□□□□□ -0.21
CSMD2-202ENST00000338325 SLC38A10Q9HBR0 1119 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 RAVER2Q9HCJ3 691 aaKnown RBP13.74□□□□□ -0.21
CSMD2-202ENST00000338325 FBXO40Q9UH90 709 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 IGKV6D-41A0A0C4DH26 115 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 GSG1L2A8MUP6 293 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 ARVCFO00192 962 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 PSRC1Q6PGN9 363 aaPredicted RBP13.74□□□□□ -0.21
CSMD2-202ENST00000338325 ARMCX2Q7L311 632 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 TMEM199Q8N511 208 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 CHST13Q8NET6 341 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 VTI1AQ96AJ9 217 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms