RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 CEP95Q96GE4 821 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 ZC3H12CQ9C0D7 883 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 TMX1Q9H3N1 280 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 CYP2D7A0A087X1C5 515 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 LOC102724159A0A0B4J2E5 919 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 IGHA2P01877 340 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 FDX1P10109 184 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 BRD2P25440 801 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 HSD17B4P51659 736 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 TFAP4Q01664 338 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 SPIRE1Q08AE8 756 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 DPYDQ12882 1025 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 PWP2Q15269 919 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 LRRC2Q9BYS8 371 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 NOL7Q9UMY1 257 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 ERICH2A1L162 156 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 AP5Z1O43299 807 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 GCFC2P16383 781 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 OAZ1P54368 228 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 NLRP12P59046 1061 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 CUL4BQ13620 913 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 KANK3Q6NY19 840 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 TRIM22Q8IYM9 498 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 TGFBRAP1Q8WUH2 860 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 KANSL2Q9H9L4 492 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 KBTBD4Q9NVX7 518 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 ZNF70Q9UC06 446 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 USP20Q9Y2K6 914 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 MGAMO43451 1857 aa6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 PDCD11Q14690 1871 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-201ENST00000337659 BCRP11274 1271 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 USP11P51784 963 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 TBX2Q13207 712 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 KRT25Q7Z3Z0 450 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 DIS3L2Q8IYB7 885 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 KRI1Q8N9T8 703 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 JMJD4Q9H9V9 463 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 MCM9Q9NXL9 1143 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 KIAA1468Q9P260 1216 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 DDTLA6NHG4 134 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 ADAMTS3O15072 1205 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 PFKFB1P16118 471 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 GTF2IP78347 998 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 CDKAL1Q5VV42 579 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 KRBA2Q6ZNG9 492 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 CCDC12Q8WUD4 166 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 LENG9Q96B70 501 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 PIM2Q9P1W9 311 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 ITIH6Q6UXX5 1313 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 WNT7AO00755 349 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 AKR1B1P15121 316 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 ERCC5P28715 1186 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 JAG1P78504 1218 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 NAALADL2Q58DX5 795 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 BLIDQ8IZY5 108 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 BICD2Q8TD16 824 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 HHIPL1Q96JK4 782 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 KIAA1683Q9H0B3 1180 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 RABGAP1Q9Y3P9 1069 aa6.16□□□□□ -1.42
PRPF4B-201ENST00000337659 SLFN14P0C7P3 912 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 NDUFA8P51970 172 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 CCT2P78371 535 aaKnown RBP6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 TYRO3Q06418 890 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 STX1AQ16623 288 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 CHST3Q7LGC8 479 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 AMOTL1Q8IY63 956 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 SENP7Q9BQF6 1050 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 NUP62CLQ9H1M0 184 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 TTF2Q9UNY4 1162 aaKnown RBP6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 KLRC4O43908 158 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 BMP6P22004 513 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 MARSP56192 900 aaKnown RBP6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 IRF5Q13568 498 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 SEPT2Q15019 361 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 ETNPPLQ8TBG4 499 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 OXER1Q8TDS5 423 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 AIFM3Q96NN9 605 aa6.15□□□□□ -1.42
PRPF4B-201ENST00000337659 A0A087X0B3 334 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 PSMD14O00487 310 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 ZBTB5O15062 677 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 NMT2O60551 498 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 TPM3P06753 285 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 XBP1P17861 261 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 SREBF1P36956 1147 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 NFIAQ12857 509 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 SF3A1Q15459 793 aaKnown RBP6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 CAVIN1Q6NZI2 390 aaKnown RBP6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 SYNE3Q6ZMZ3 975 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 ZNF662Q6ZS27 426 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 FAM43BQ6ZT52 329 aaPredicted RBP6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 STAG2Q8N3U4 1231 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 DYNLL2Q96FJ2 89 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 CHAMP1Q96JM3 812 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 MED15Q96RN5 788 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 C7orf25Q9BPX7 421 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 MMTAG2Q9BU76 263 aaKnown RBP6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 KAT14Q9H8E8 782 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 USP40Q9NVE5 1235 aa6.15□□□□□ -1.43
PRPF4B-201ENST00000337659 IMPACTQ9P2X3 320 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms