RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 SECISBP2LQ93073 1101 aaKnown RBP11.09□□□□□ -0.63
TRIM16-201ENST00000336708 GSDMAQ96QA5 445 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 DDX41Q9UJV9 622 aaKnown RBP11.09□□□□□ -0.63
TRIM16-201ENST00000336708 ATP6V0A2Q9Y487 856 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 PAXBP1Q9Y5B6 917 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
TRIM16-201ENST00000336708 CUL4BQ13620 913 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 MFSD14BQ5SR56 506 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 WWC2Q6AWC2 1192 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 DHX58Q96C10 678 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 BAZ2BQ9UIF8 2168 aaKnown RBP11.09□□□□□ -0.63
TRIM16-201ENST00000336708 RGPD3A6NKT7 1758 aaPredicted RBP11.09□□□□□ -0.63
TRIM16-201ENST00000336708 RGPD4Q7Z3J3 1758 aa11.09□□□□□ -0.63
TRIM16-201ENST00000336708 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.63
TRIM16-201ENST00000336708 LONP1P36776 959 aaKnown RBP11.08□□□□□ -0.63
TRIM16-201ENST00000336708 PDILTQ8N807 584 aa11.08□□□□□ -0.63
TRIM16-201ENST00000336708 CCDC148Q8NFR7 591 aa11.08□□□□□ -0.63
TRIM16-201ENST00000336708 COA1Q9GZY4 146 aa11.08□□□□□ -0.63
TRIM16-201ENST00000336708 CALCOCO1Q9P1Z2 691 aa11.08□□□□□ -0.63
TRIM16-201ENST00000336708 SAP30BPQ9UHR5 308 aaKnown RBP11.08□□□□□ -0.63
TRIM16-201ENST00000336708 PCDHA6Q9UN73 950 aa11.08□□□□□ -0.63
TRIM16-201ENST00000336708 PCDHA8Q9Y5H6 950 aa11.08□□□□□ -0.63
TRIM16-201ENST00000336708 ADAMTSL1Q8N6G6 1762 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 SLC4A8Q2Y0W8 1093 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 E4F1Q66K89 784 aaPredicted RBP11.08□□□□□ -0.64
TRIM16-201ENST00000336708 KIF18AQ8NI77 898 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 EYA3Q99504 573 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 TNS1Q9HBL0 1735 aaKnown RBP11.08□□□□□ -0.64
TRIM16-201ENST00000336708 VWA3AA6NCI4 1184 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 POLR3GO15318 223 aaPredicted RBP11.08□□□□□ -0.64
TRIM16-201ENST00000336708 SERPINC1P01008 464 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 SFPQP23246 707 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRIM16-201ENST00000336708 HNRNPH2P55795 449 aaKnown RBP11.08□□□□□ -0.64
TRIM16-201ENST00000336708 GABPAQ06546 454 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 SYCP1Q15431 976 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 TXNRD1Q16881 649 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 GPKOWQ92917 476 aaPredicted RBP eCLIP11.08□□□□□ -0.64
TRIM16-201ENST00000336708 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 NFE2L3Q9Y4A8 694 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 DAGLAQ9Y4D2 1042 aa11.08□□□□□ -0.64
TRIM16-201ENST00000336708 IGKV6D-41A0A0C4DH26 115 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 TRIM37O94972 964 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 APTXQ7Z2E3 356 aaKnown RBP11.07□□□□□ -0.64
TRIM16-201ENST00000336708 ZMYND12Q9H0C1 365 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 SIPA1L1O43166 1804 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 MYO3BQ8WXR4 1341 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 LAD1O00515 517 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 SRGNP10124 158 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 TOP1P11387 765 aaKnown RBP11.07□□□□□ -0.64
TRIM16-201ENST00000336708 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
TRIM16-201ENST00000336708 PRPHP41219 470 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 ZNF827Q17R98 1081 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 CEP135Q66GS9 1140 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 IQUBQ8NA54 791 aa11.07□□□□□ -0.64
TRIM16-201ENST00000336708 TMEM232C9JQI7 657 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 KIF2AO00139 706 aaPredicted RBP11.06□□□□□ -0.64
TRIM16-201ENST00000336708 RXRBP28702 533 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 MCM7P33993 719 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 NR1I3Q14994 352 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 CFAP100Q494V2 611 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 CDKAL1Q5VV42 579 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 SPATA1Q5VX52 437 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 TMEM139Q8IV31 216 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 MTRQ99707 1265 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 A0A1B0GTH6 734 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 KLRF2D3W0D1 207 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 GTPBP6O43824 516 aaPredicted RBP11.06□□□□□ -0.64
TRIM16-201ENST00000336708 TUBB4AP04350 444 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 NPR1P16066 1061 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 PTPN14Q15678 1187 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
TRIM16-201ENST00000336708 TRMT1Q9NXH9 659 aaKnown RBP11.06□□□□□ -0.64
TRIM16-201ENST00000336708 hCG_1984214I3L0E3 225 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 PLSCR1O15162 318 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 SNHG28P0DPA3 235 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 KMT5BQ4FZB7 885 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 NLGN1Q8N2Q7 840 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 ZNF713Q8N859 430 aaPredicted RBP11.05□□□□□ -0.64
TRIM16-201ENST00000336708 PPP1R13BQ96KQ4 1090 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 RIOX1Q9H6W3 641 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 STX8Q9UNK0 236 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 ESYT2A0FGR8 921 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 C6orf229H3BNL8 230 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 PARP1P09874 1014 aaKnown RBP11.05□□□□□ -0.64
TRIM16-201ENST00000336708 AFMP43652 599 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 ORC2Q13416 577 aaPredicted RBP11.05□□□□□ -0.64
TRIM16-201ENST00000336708 ELF2Q15723 593 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 CERS5Q8N5B7 392 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 CEP95Q96GE4 821 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 SAMSN1Q9NSI8 373 aaKnown RBP11.05□□□□□ -0.64
TRIM16-201ENST00000336708 RSPH14Q9UHP6 348 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 PBX1P40424 430 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 GTF2IP78347 998 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 C10orf67Q8IYJ2 551 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 NEK11Q8NG66 645 aa11.05□□□□□ -0.64
TRIM16-201ENST00000336708 CCDC12Q8WUD4 166 aaPredicted RBP11.05□□□□□ -0.64
TRIM16-201ENST00000336708 CCSER1Q9C0I3 900 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms