RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TCP10L2B9ZVM9 353 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 STXBP3O00186 592 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
LIMK1-201ENST00000336180 ZBTB7AO95365 584 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 CCDC84Q86UT8 332 aaPredicted RBP14.33□□□□□ -0.12
LIMK1-201ENST00000336180 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 SMARCE1Q969G3 411 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 BCCIPQ9P287 314 aaKnown RBP eCLIP14.33□□□□□ -0.12
LIMK1-201ENST00000336180 CFAP100Q494V2 611 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 DNAJC18Q9H819 358 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 SAMSN1Q9NSI8 373 aaKnown RBP14.33□□□□□ -0.12
LIMK1-201ENST00000336180 PALM3A6NDB9 673 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-201ENST00000336180 PLCG2P16885 1265 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 OSBPL5Q9H0X9 879 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-201ENST00000336180 HSD3B7Q9H2F3 369 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 CCNT1O60563 726 aaKnown RBP14.32□□□□□ -0.12
LIMK1-201ENST00000336180 SHMT1P34896 483 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 FANCCQ00597 558 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-201ENST00000336180 ZYXQ15942 572 aaKnown RBP14.32□□□□□ -0.12
LIMK1-201ENST00000336180 SLF2Q8IX21 1173 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 STK32BQ9NY57 414 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 PCDHA4Q9UN74 947 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 CEP131Q9UPN4 1083 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-201ENST00000336180 YDJCA8MPS7 323 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 PDHBP11177 359 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 CD44P16070 742 aaKnown RBP14.32□□□□□ -0.12
LIMK1-201ENST00000336180 JAG1P78504 1218 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 KIAA1524Q8TCG1 905 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 PRMT6Q96LA8 375 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-201ENST00000336180 MED15Q96RN5 788 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 MTMR4Q9NYA4 1195 aa14.32□□□□□ -0.12
LIMK1-201ENST00000336180 SHTN1A0MZ66 631 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 USP17L10C9JJH3 530 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 RCAN1P53805 252 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 CUL4BQ13620 913 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 SH3BP5LQ7L8J4 393 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 PAGE5Q96GU1 130 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 TUBE1Q9UJT0 475 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 TOP1P11387 765 aaKnown RBP14.31□□□□□ -0.12
LIMK1-201ENST00000336180 IKQ13123 557 aaPredicted RBP14.31□□□□□ -0.12
LIMK1-201ENST00000336180 SEPT2Q15019 361 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 PPP2R5BQ15173 497 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 SEC63Q9UGP8 760 aaKnown RBP14.31□□□□□ -0.12
LIMK1-201ENST00000336180 PCNTO95613 3336 aa14.31□□□□□ -0.12
LIMK1-201ENST00000336180 CDK11BP21127 795 aaKnown RBP14.3□□□□□ -0.12
LIMK1-201ENST00000336180 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.3□□□□□ -0.12
LIMK1-201ENST00000336180 TMX1Q9H3N1 280 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 FAM198AQ9UFP1 575 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 NFE2L3Q9Y4A8 694 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 TNNI2P48788 182 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 DPYDQ12882 1025 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
LIMK1-201ENST00000336180 DACT2Q5SW24 774 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 RBM26Q5T8P6 1007 aaKnown RBP14.3□□□□□ -0.12
LIMK1-201ENST00000336180 RRP36Q96EU6 259 aaKnown RBP14.3□□□□□ -0.12
LIMK1-201ENST00000336180 MTRQ99707 1265 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 BARHL2Q9NY43 387 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 UQCRHLA0A096LP55 91 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 UQCRHP07919 91 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 SKILP12757 684 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 ERCC3P19447 782 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 UBASH3AP57075 661 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 LRRC15Q8TF66 581 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 VEZTQ9HBM0 779 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 ZNF287Q9HBT7 754 aa14.3□□□□□ -0.12
LIMK1-201ENST00000336180 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 TECP42680 631 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 ATP2C1P98194 919 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-201ENST00000336180 MYL5Q02045 173 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 SOGA3Q5TF21 947 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 MIGA2Q7L4E1 593 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 HPS3Q969F9 1004 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 FAM163AQ96GL9 167 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-201ENST00000336180 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-201ENST00000336180 DDX60LQ5H9U9 1706 aaKnown RBP14.29□□□□□ -0.12
LIMK1-201ENST00000336180 LRRC8AQ8IWT6 810 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 TBCKQ8TEA7 893 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 CPLX3Q8WVH0 158 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 ROBO3Q96MS0 1386 aa14.29□□□□□ -0.12
LIMK1-201ENST00000336180 PPP1R11O60927 126 aaPredicted RBP14.28□□□□□ -0.12
LIMK1-201ENST00000336180 TXKP42681 527 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 GABPAQ06546 454 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 RRP1BQ14684 758 aaKnown RBP14.28□□□□□ -0.12
LIMK1-201ENST00000336180 GPIHBP1Q8IV16 184 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 TIGD1Q96MW7 591 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 NAV1Q8NEY1 1877 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 COL11A2P13942 1736 aaPredicted RBP14.28□□□□□ -0.12
LIMK1-201ENST00000336180 TDP2O95551 362 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 EEF2P13639 858 aaKnown RBP14.28□□□□□ -0.12
LIMK1-201ENST00000336180 DPEP1P16444 411 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 USH1GQ495M9 461 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 SLC30A10Q6XR72 485 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 POTEDQ86YR6 584 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 CAMKK2Q96RR4 588 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 HLA-DOAP06340 250 aa14.28□□□□□ -0.12
LIMK1-201ENST00000336180 TPD52L1Q16890 204 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms