RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CCDC66A2RUB6 948 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
C9orf47-201ENST00000334490 CCDC122Q5T0U0 273 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 LMBRD1Q9NUN5 540 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 RTEL1Q9NZ71 1219 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 ZNF569Q5MCW4 686 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 CBX8Q9HC52 389 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.69■□□□□ 0.26
C9orf47-201ENST00000334490 MYO3BQ8WXR4 1341 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 TNNI1P19237 187 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 CLIC6Q96NY7 704 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 LARSQ9P2J5 1176 aaKnown RBP16.69■□□□□ 0.26
C9orf47-201ENST00000334490 ZKSCAN5Q9Y2L8 839 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 ASNSP08243 561 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 KRT9P35527 623 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 SLFNL1Q499Z3 407 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 PPP1R9BQ96SB3 815 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 SRRTQ9BXP5 876 aaKnown RBP16.69■□□□□ 0.26
C9orf47-201ENST00000334490 RBSNQ9H1K0 784 aa16.69■□□□□ 0.26
C9orf47-201ENST00000334490 ABT1Q9ULW3 272 aaKnown RBP16.69■□□□□ 0.26
C9orf47-201ENST00000334490 SH2B2O14492 632 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-201ENST00000334490 GH2P01242 217 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 CD19P15391 556 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 TRIM14Q14142 442 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 ZBTB8OSQ8IWT0 167 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 COA7Q96BR5 231 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 PSMD1Q99460 953 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-201ENST00000334490 MAP2K1Q02750 393 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-201ENST00000334490 GRIPAP1Q4V328 841 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 RC3H1Q5TC82 1133 aaKnown RBP16.68■□□□□ 0.26
C9orf47-201ENST00000334490 RNF169Q8NCN4 708 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 NSUN7Q8NE18 718 aaKnown RBP16.68■□□□□ 0.26
C9orf47-201ENST00000334490 RASAL2Q9UJF2 1139 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 CHRNA5P30532 468 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 HACE1Q8IYU2 909 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 CAPZA3Q96KX2 299 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 CPDO75976 1380 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 GPSM2P81274 684 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 BARGINQ6ZT62 677 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 NOX5Q96PH1 765 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 CGNQ9P2M7 1197 aaKnown RBP16.68■□□□□ 0.26
C9orf47-201ENST00000334490 ADD3Q9UEY8 706 aaKnown RBP16.68■□□□□ 0.26
C9orf47-201ENST00000334490 PCDHA4Q9UN74 947 aa16.68■□□□□ 0.26
C9orf47-201ENST00000334490 CMA1P23946 247 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 SYDE2Q5VT97 1194 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 LRCH2Q5VUJ6 765 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 FAM178BQ8IXR5 827 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 MYOCDQ8IZQ8 938 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 SPATA31A7Q8IWB4 1347 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 CYP2J2P51589 502 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 PKP1Q13835 747 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 DLC1Q96QB1 1528 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 SP8Q8IXZ3 490 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 NRBP2Q9NSY0 501 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 KIAA1468Q9P260 1216 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 CYP2D6P10635 497 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 IFNAR1P17181 557 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 LIFRP42702 1097 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 IGBP1P78318 339 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 ASIC2Q16515 512 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 BCORL1Q5H9F3 1711 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 GPIHBP1Q8IV16 184 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 PGBD1Q96JS3 809 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 SPON1Q9HCB6 807 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 LAMC1P11047 1609 aa16.67■□□□□ 0.26
C9orf47-201ENST00000334490 NEXMIFQ5QGS0 1516 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 NRKQ7Z2Y5 1582 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
C9orf47-201ENST00000334490 ARHGEF6Q15052 776 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 CCDC84Q86UT8 332 aaPredicted RBP16.66■□□□□ 0.26
C9orf47-201ENST00000334490 BBXQ8WY36 941 aaPredicted RBP16.66■□□□□ 0.26
C9orf47-201ENST00000334490 FOXP1Q9H334 677 aaPredicted RBP16.66■□□□□ 0.26
C9orf47-201ENST00000334490 CLIC4Q9Y696 253 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 PIK3C2BO00750 1634 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 LRRC7Q96NW7 1537 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 PLEKHG2Q9H7P9 1386 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 SPOPO43791 374 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 TUBB4AP04350 444 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 CTR9Q6PD62 1173 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 FOXO4P98177 505 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 NUP58Q9BVL2 599 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 RPAP1Q9BWH6 1393 aaPredicted RBP16.66■□□□□ 0.26
C9orf47-201ENST00000334490 NR1I2O75469 434 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 LONP1P36776 959 aaKnown RBP16.66■□□□□ 0.26
C9orf47-201ENST00000334490 LIG4P49917 911 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 CCDC117Q8IWD4 279 aaPredicted RBP16.66■□□□□ 0.26
C9orf47-201ENST00000334490 COL4A3BPQ9Y5P4 624 aa16.66■□□□□ 0.26
C9orf47-201ENST00000334490 TMOD1P28289 359 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 POLGP54098 1239 aaPredicted RBP16.65■□□□□ 0.26
C9orf47-201ENST00000334490 NECTIN1Q15223 517 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 DGKHQ86XP1 1220 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 TBCKQ8TEA7 893 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms