RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 KCTD1Q719H9 257 aa12.52□□□□□ -0.4
POLR1B-202ENST00000333990 HOOK3Q86VS8 718 aa12.52□□□□□ -0.4
POLR1B-202ENST00000333990 USP28Q96RU2 1077 aa12.52□□□□□ -0.4
POLR1B-202ENST00000333990 MAGEF1Q9HAY2 307 aa12.52□□□□□ -0.4
POLR1B-202ENST00000333990 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.4
POLR1B-202ENST00000333990 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 CA8P35219 290 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 NSUN7Q8NE18 718 aaKnown RBP12.52□□□□□ -0.41
POLR1B-202ENST00000333990 CYP2D7A0A087X1C5 515 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 A0A0G2JLW4 131 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 KRT86O43790 486 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 SKILP12757 684 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 CMA1P23946 247 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 SLC8A3P57103 927 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 KIF5AQ12840 1032 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 EZH2Q15910 746 aaKnown RBP12.52□□□□□ -0.41
POLR1B-202ENST00000333990 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 ZBTB8OSQ8IWT0 167 aa12.52□□□□□ -0.41
POLR1B-202ENST00000333990 TACC1O75410 805 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 FDX1P10109 184 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 TMOD1P28289 359 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 TRPC3Q13507 836 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 SPECC1Q5M775 1068 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
POLR1B-202ENST00000333990 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 DEPTORQ8TB45 409 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 AK8Q96MA6 479 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 MRPL44Q9H9J2 332 aaKnown RBP12.51□□□□□ -0.41
POLR1B-202ENST00000333990 IFNKQ9P0W0 207 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 FBXO40Q9UH90 709 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 DNA2P51530 1060 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 ZNF526Q8TF50 670 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-202ENST00000333990 CUEDC2Q9H467 287 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 ABT1Q9ULW3 272 aaKnown RBP12.51□□□□□ -0.41
POLR1B-202ENST00000333990 SYNRGQ9UMZ2 1314 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 C3P01024 1663 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 GOLGA6L10A0A0M3HER8 536 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 USP17L5A8MUK1 530 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 EXOC3O60645 756 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 CCDC175P0C221 793 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 NLRP12P59046 1061 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 GNG11P61952 73 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 PRPF4BQ13523 1007 aaKnown RBP12.51□□□□□ -0.41
POLR1B-202ENST00000333990 KIFAP3Q92845 792 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 CTNND2Q9UQB3 1225 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 GSTTP1A0A1W2PQM5 241 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 GCNT3O95395 438 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 GBP2P32456 591 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-202ENST00000333990 TECP42680 631 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 CUL4AQ13619 759 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
POLR1B-202ENST00000333990 MAP2P11137 1827 aaKnown RBP12.5□□□□□ -0.41
POLR1B-202ENST00000333990 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 STX10O60499 249 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 PTGDRQ13258 359 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 SLC10A5Q5PT55 438 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 PIGSQ96S52 555 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 COL4A3BPQ9Y5P4 624 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 UBR1Q8IWV7 1749 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 XKR9Q5GH70 373 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 CCDC84Q86UT8 332 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-202ENST00000333990 TRIML1Q8N9V2 468 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 WRNIP1Q96S55 665 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 CRACR2AQ9BSW2 395 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 JADE2Q9NQC1 790 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 HOXC10Q9NYD6 342 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 CACNB3P54284 484 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 TAF12Q16514 161 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 LRRC45Q96CN5 670 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 NUP58Q9BVL2 599 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 SELENOOQ9BVL4 669 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 MTFR1LQ9H019 292 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.5□□□□□ -0.41
POLR1B-202ENST00000333990 KIF20BQ96Q89 1820 aa12.5□□□□□ -0.41
POLR1B-202ENST00000333990 CNGA1P29973 690 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 LRCH2Q5VUJ6 765 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 MAEAQ7L5Y9 396 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 GPBP1Q86WP2 473 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 C16orf45Q96MC5 204 aaPredicted RBP12.49□□□□□ -0.41
POLR1B-202ENST00000333990 GNA14O95837 355 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 GYS1P13807 737 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 SLC16A2P36021 539 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 SNX16P57768 344 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 CKAP4Q07065 602 aaKnown RBP12.49□□□□□ -0.41
POLR1B-202ENST00000333990 FAM47CQ5HY64 1035 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 EXOC8Q8IYI6 725 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 RTEL1Q9NZ71 1219 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 A0A1W2PQ27 194 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 A0A1W2PQ64 194 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 A0A1W2PQD8 194 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 PFKFB1P16118 471 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 ARID5AQ03989 594 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 CDC37Q16543 378 aaPredicted RBP12.49□□□□□ -0.41
POLR1B-202ENST00000333990 HHIPL2Q6UWX4 724 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 FBXO41Q8TF61 875 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms