RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 LONP1P36776 959 aaKnown RBP16.85■□□□□ 0.29
CLCNKA-201ENST00000331433 ADKP55263 362 aaKnown RBP16.85■□□□□ 0.29
CLCNKA-201ENST00000331433 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
CLCNKA-201ENST00000331433 TXNRD1Q16881 649 aa16.85■□□□□ 0.29
CLCNKA-201ENST00000331433 TMEM139Q8IV31 216 aa16.85■□□□□ 0.29
CLCNKA-201ENST00000331433 DAGLBQ8NCG7 672 aa16.85■□□□□ 0.29
CLCNKA-201ENST00000331433 VAT1LQ9HCJ6 419 aa16.85■□□□□ 0.29
CLCNKA-201ENST00000331433 LTBP1Q14766 1721 aa16.85■□□□□ 0.29
CLCNKA-201ENST00000331433 NAPAP54920 295 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 APTXQ7Z2E3 356 aaKnown RBP16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 LZTS2Q9BRK4 669 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 SPZ1Q9BXG8 430 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 TEX33O43247 280 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 NR1I3Q14994 352 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 SP8Q8IXZ3 490 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 ANKRD7Q92527 254 aa16.84■□□□□ 0.29
CLCNKA-201ENST00000331433 BRWD3Q6RI45 1802 aa16.83■□□□□ 0.29
CLCNKA-201ENST00000331433 A0A1B0GTH6 734 aa16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 USP17L5A8MUK1 530 aa16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 SYT10Q6XYQ8 523 aa16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 DTHD1Q6ZMT9 781 aa16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 CERS5Q8N5B7 392 aa16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 TC2NQ8N9U0 490 aa16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 UBA5Q9GZZ9 404 aa16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 LRRC37AA6NMS7 1700 aa16.83■□□□□ 0.28
CLCNKA-201ENST00000331433 KIF2AO00139 706 aaPredicted RBP16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 TXLNAP40222 546 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 STAT6P42226 847 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 CT47A1Q5JQC4 288 aaPredicted RBP16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 RRAGBQ5VZM2 374 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 GALNT17Q6IS24 598 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 CLEC10AQ8IUN9 316 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 PYM1Q9BRP8 204 aaKnown RBP16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 ZMYND12Q9H0C1 365 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 ANKRD31Q8N7Z5 1873 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 CDKAL1Q5VV42 579 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 RASSF8Q8NHQ8 419 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 PIGSQ96S52 555 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 PLIN2Q99541 437 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 DISC1Q9NRI5 854 aa16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 ZNF215Q9UL58 517 aaPredicted RBP16.82■□□□□ 0.28
CLCNKA-201ENST00000331433 DOK7Q18PE1 504 aa16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 NAALADL2Q58DX5 795 aa16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 RRP36Q96EU6 259 aaKnown RBP16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 BAG1Q99933 345 aaPredicted RBP16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 COA1Q9GZY4 146 aa16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 SMCO2A6NFE2 343 aa16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 SCNN1DP51172 638 aa16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 ZC3H12CQ9C0D7 883 aaKnown RBP16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 MAPK8IP1Q9UQF2 711 aa16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 FOCADQ5VW36 1801 aa16.81■□□□□ 0.28
CLCNKA-201ENST00000331433 ARHGAP6O43182 974 aa16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 RPN1P04843 607 aaKnown RBP16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 SRGNP10124 158 aa16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 AKR1B1P15121 316 aa16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 LETM2Q2VYF4 491 aa16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 TMC4Q7Z404 712 aa16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 LRRC47Q8N1G4 583 aaKnown RBP16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 PDCL2Q8N4E4 241 aa16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 SEC63Q9UGP8 760 aaKnown RBP16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 V9GYY5 206 aaPredicted RBP16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 ADD3Q9UEY8 706 aaKnown RBP16.8■□□□□ 0.28
CLCNKA-201ENST00000331433 CCNT1O60563 726 aaKnown RBP16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 PDHBP11177 359 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 UBA7P41226 1012 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 NOVP48745 357 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 GABPAQ06546 454 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 DPP8Q6V1X1 898 aaPredicted RBP16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 CCDC12Q8WUD4 166 aaPredicted RBP16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 MTMR4Q9NYA4 1195 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 NONOQ15233 471 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 C6orf50Q9HD87 102 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 PPP2R2CQ9Y2T4 447 aa16.79■□□□□ 0.28
CLCNKA-201ENST00000331433 CCP110O43303 1012 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 PAK1Q13153 545 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 SYCP1Q15431 976 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 ZNF658Q5TYW1 1059 aaPredicted RBP16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 TOGARAM2Q6ZUX3 1019 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 KRT25Q7Z3Z0 450 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 NELFBQ8WX92 580 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 BIN2Q9UBW5 565 aaPredicted RBP16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 STX10O60499 249 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 GNA11P29992 359 aa16.78■□□□□ 0.28
CLCNKA-201ENST00000331433 ETF1P62495 437 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms