RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 TYW1BQ6NUM6 668 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 SH3RF1Q7Z6J0 888 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 IFT81Q8WYA0 676 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 NHEJ1Q9H9Q4 299 aaPredicted RBP16■□□□□ 0.15
CHRNA3-201ENST00000326828 RWDD2AQ9UIY3 292 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 NKRFO15226 690 aaKnown RBP eCLIP16■□□□□ 0.15
CHRNA3-201ENST00000326828 TBC1D8BQ0IIM8 1120 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 PKN1Q16512 942 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 CCDC70Q6NSX1 233 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
CHRNA3-201ENST00000326828 CAPN7Q9Y6W3 813 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 C4AP0C0L4 1744 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 C4BP0C0L5 1744 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 MOCS3O95396 460 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 KRT14P02533 472 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 INPP5BP32019 993 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 TUBB4BP68371 445 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 SPAG1Q07617 926 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 NFRKBQ6P4R8 1299 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 IRF2BP1Q8IU81 584 aa16■□□□□ 0.15
CHRNA3-201ENST00000326828 ELOA2Q8IYF1 753 aaPredicted RBP16■□□□□ 0.15
CHRNA3-201ENST00000326828 PSMD14O00487 310 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 CYP7A1P22680 504 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 MTIF2P46199 727 aaKnown RBP15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 CKAP4Q07065 602 aaKnown RBP15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 KIF5AQ12840 1032 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 SF3A3Q12874 501 aaKnown RBP eCLIP15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 RNF187Q5TA31 235 aaPredicted RBP15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 HPS3Q969F9 1004 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 ITIH6Q6UXX5 1313 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 MYO1FO00160 1098 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 TUBBP07437 444 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 AARSP49588 968 aaKnown RBP eCLIP15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 IL17AQ16552 155 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 FAM207AQ9NSI2 230 aaPredicted RBP15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 RGPD5Q99666 1765 aa15.99■□□□□ 0.15
CHRNA3-201ENST00000326828 PCCAP05165 728 aaPredicted RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 GUCY2FP51841 1108 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 CTSWP56202 376 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 PTPROQ16827 1216 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 FAM47AQ5JRC9 791 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 CATIPQ7Z7H3 387 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 FERMT2Q96AC1 680 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 CAPN6Q9Y6Q1 641 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 ZC3H4Q9UPT8 1303 aaKnown RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 FAM170AA1A519 330 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 MCM3P25205 808 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 CYLC1P35663 651 aaPredicted RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 KRT83P78385 493 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 CCDC178Q5BJE1 867 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 CSGALNACT2Q8N6G5 542 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 ENAHQ8N8S7 591 aaPredicted RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 TSEN2Q8NCE0 465 aaKnown RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 CCDC42Q96M95 316 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 RIC1Q4ADV7 1423 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 ZSCAN5CA6NGD5 496 aaPredicted RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 BUB1O43683 1085 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 ZNF658Q5TYW1 1059 aaPredicted RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 SECISBP2LQ93073 1101 aaKnown RBP15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 VIPAS39Q9H9C1 493 aa15.98■□□□□ 0.15
CHRNA3-201ENST00000326828 APBA1Q02410 837 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 SPA17Q15506 151 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 ESR2Q92731 530 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 MS4A14Q96JA4 679 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 PHF20Q9BVI0 1012 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 WTIPA6NIX2 430 aaPredicted RBP15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 SEMA3EO15041 775 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 HNRNPH1P31943 449 aaKnown RBP15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 TRIM14Q14142 442 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 C2CD5Q86YS7 1000 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 TUBGCP2Q9BSJ2 902 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 MST1RQ04912 1400 aa15.97■□□□□ 0.15
CHRNA3-201ENST00000326828 GTPBP6O43824 516 aaPredicted RBP15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 PDXDC2PQ6P474 469 aa15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 ADGRA1Q86SQ6 560 aa15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 RNF26Q9BY78 433 aaPredicted RBP15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 MYO5AQ9Y4I1 1855 aaKnown RBP15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 LGALS16A8MUM7 142 aa15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 CSF1RP07333 972 aa15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 DYNLL1P63167 89 aaKnown RBP15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 GUCY1A3Q02108 690 aa15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 MCTP2Q6DN12 878 aa15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 TMC4Q7Z404 712 aa15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 FAM184BQ9ULE4 1060 aa15.96■□□□□ 0.15
CHRNA3-201ENST00000326828 ATP2C2O75185 946 aa15.96■□□□□ 0.14
CHRNA3-201ENST00000326828 KIAA0754O94854 1291 aa15.96■□□□□ 0.14
CHRNA3-201ENST00000326828 UQCRFS1P1P0C7P4 283 aa15.96■□□□□ 0.14
CHRNA3-201ENST00000326828 PPFIA1Q13136 1202 aa15.96■□□□□ 0.14
CHRNA3-201ENST00000326828 PUM3Q15397 648 aaKnown RBP15.96■□□□□ 0.14
CHRNA3-201ENST00000326828 TICAM2Q86XR7 235 aa15.96■□□□□ 0.14
CHRNA3-201ENST00000326828 PROCA1Q8NCQ7 364 aaPredicted RBP15.96■□□□□ 0.14
CHRNA3-201ENST00000326828 STAG1Q8WVM7 1258 aa15.96■□□□□ 0.14
CHRNA3-201ENST00000326828 MYCBPQ99417 103 aaPredicted RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms