RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 RRP9O43818 475 aaKnown RBP12.05□□□□□ -0.48
CUL4A-201ENST00000326335 RAD17O75943 681 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 TDP2O95551 362 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L24Q0WX57 530 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 KCTD19Q17RG1 926 aaPredicted RBP12.05□□□□□ -0.48
CUL4A-201ENST00000326335 RC3H1Q5TC82 1133 aaKnown RBP12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L6PQ6QN14 398 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 IGSF22Q8N9C0 903 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 IQUBQ8NA54 791 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 KIF18AQ8NI77 898 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 CCDC34Q96HJ3 373 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 PKD2L1Q9P0L9 805 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 DDAH1O94760 285 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 TRIM47Q96LD4 638 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
CUL4A-201ENST00000326335 VEZTQ9HBM0 779 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 SLC39A2Q9NP94 309 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 STK36Q9NRP7 1315 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 AOC3Q16853 763 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 RRP36Q96EU6 259 aaKnown RBP12.04□□□□□ -0.48
CUL4A-201ENST00000326335 CDK5RAP3Q96JB5 506 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 TUBE1Q9UJT0 475 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 ANAPC4Q9UJX5 808 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 CASP14P31944 242 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 SARM1Q6SZW1 724 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 NELFBQ8WX92 580 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 PRIMPOLQ96LW4 560 aa12.04□□□□□ -0.48
CUL4A-201ENST00000326335 BAG1Q99933 345 aaPredicted RBP12.04□□□□□ -0.48
CUL4A-201ENST00000326335 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
CUL4A-201ENST00000326335 C21orf2O43822 256 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 SLFN14P0C7P3 912 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 MIGA2Q7L4E1 593 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 FCHSD1Q86WN1 690 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 MTRQ99707 1265 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 PCDHA6Q9UN73 950 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 PCDHA8Q9Y5H6 950 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 PLCH1Q4KWH8 1693 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 FCER1AP12319 257 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 GSDMDP57764 484 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 RBL2Q08999 1139 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 PUF60Q9UHX1 559 aaKnown RBP12.03□□□□□ -0.48
CUL4A-201ENST00000326335 PCDHA4Q9UN74 947 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 POLRMTO00411 1230 aaKnown RBP12.03□□□□□ -0.48
CUL4A-201ENST00000326335 CBFA2T2O43439 604 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 UBXN1Q04323 297 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
CUL4A-201ENST00000326335 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
CUL4A-201ENST00000326335 TEX35Q5T0J7 233 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 C2CD5Q86YS7 1000 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 MNS1Q8NEH6 495 aa12.03□□□□□ -0.48
CUL4A-201ENST00000326335 SEMA3EO15041 775 aa12.02□□□□□ -0.48
CUL4A-201ENST00000326335 ORC4O43929 436 aa12.02□□□□□ -0.48
CUL4A-201ENST00000326335 PLCG1P19174 1290 aa12.02□□□□□ -0.48
CUL4A-201ENST00000326335 ACRBPQ8NEB7 543 aa12.02□□□□□ -0.48
CUL4A-201ENST00000326335 ABL1P00519 1130 aa12.02□□□□□ -0.49
CUL4A-201ENST00000326335 PRCPP42785 496 aa12.02□□□□□ -0.49
CUL4A-201ENST00000326335 PMS1P54277 932 aaKnown RBP12.02□□□□□ -0.49
CUL4A-201ENST00000326335 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
CUL4A-201ENST00000326335 DRC1Q96MC2 740 aa12.02□□□□□ -0.49
CUL4A-201ENST00000326335 SRRTQ9BXP5 876 aaKnown RBP12.02□□□□□ -0.49
CUL4A-201ENST00000326335 TANGO6Q9C0B7 1094 aa12.02□□□□□ -0.49
CUL4A-201ENST00000326335 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
CUL4A-201ENST00000326335 TCP11L1Q9NUJ3 509 aa12.02□□□□□ -0.49
CUL4A-201ENST00000326335 NKRFO15226 690 aaKnown RBP eCLIP12.02□□□□□ -0.492e-7■□□□□ 9.9
CUL4A-201ENST00000326335 HOXA13P31271 388 aaPredicted RBP12.02□□□□□ -0.49
CUL4A-201ENST00000326335 KLK7P49862 253 aa12.02□□□□□ -0.49
CUL4A-201ENST00000326335 CARD6Q9BX69 1037 aa12.02□□□□□ -0.49
CUL4A-201ENST00000326335 PDE4DQ08499 809 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 NCBP1Q09161 790 aaKnown RBP12.01□□□□□ -0.49
CUL4A-201ENST00000326335 FKBP15Q5T1M5 1219 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 REXO1Q8N1G1 1221 aaKnown RBP12.01□□□□□ -0.49
CUL4A-201ENST00000326335 CCDC12Q8WUD4 166 aaPredicted RBP12.01□□□□□ -0.49
CUL4A-201ENST00000326335 PDCL3Q9H2J4 239 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 SERPINB13Q9UIV8 391 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 MEIS1O00470 390 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 NEMFO60524 1076 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 RPN1P04843 607 aaKnown RBP12.01□□□□□ -0.49
CUL4A-201ENST00000326335 CALML3P27482 149 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 RHBDL3P58872 404 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 MORC3Q14149 939 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 PTPROQ16827 1216 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 SPECC1LQ69YQ0 1117 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 CABP7Q86V35 215 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 VSTM4Q8IW00 320 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 NELFCDQ8IXH7 590 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 MLKLQ8NB16 471 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 CCDC150Q8NCX0 1101 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 TIGD1Q96MW7 591 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 SLF1Q9BQI6 1058 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 ARID5AQ03989 594 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 FILIP1LQ4L180 1135 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 WDR24Q96S15 920 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 PLEKHA4Q9H4M7 779 aa12.01□□□□□ -0.49
CUL4A-201ENST00000326335 DACH1Q9UI36 760 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms