RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	TERF1	P54274	439 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	RBM6	P78332	1123 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	ST3GAL1	Q11201	340 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	PRR5L	Q6MZQ0	368 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	CLEC17A	Q6ZS10	378 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	ANKRD13C	Q8N6S4	541 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	CEP95	Q96GE4	821 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	LRRC27	Q9C0I9	530 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	MAN1B1	Q9UKM7	699 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	OVOS2	A0A0G2JMS6	1433 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	GOLGA6L9	A6NEM1	432 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	TMTC3	Q6ZXV5	915 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	ALAS1	P13196	640 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	CNGA4	Q8IV77	575 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	CCDC65	Q8IXS2	484 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	PCDHB13	Q9Y5F0	798 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	ARHGAP23	Q9P227	1491 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	CTAGE9	A4FU28	777 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	MEIS1	O00470	390 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	PPP6R2	O75170	966 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	RXRB	P28702	533 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	EVC	P57679	992 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	ABCB5	Q2M3G0	1257 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	HS2ST1	Q7LGA3	356 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	TAX1BP1	Q86VP1	789 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	GDAP1L1	Q96MZ0	367 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	ZNF215	Q9UL58	517 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	CTAGE15	A4D2H0	777 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	PRR29	P0C7W0	189 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	CTAGE8	P0CG41	777 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	HOXA13	P31271	388 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	CTAGE6	Q86UF2	777 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	CTAGE4	Q8IX94	777 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	GDA	Q9Y2T3	454 aa		13.23	□□□□□ -0.29
DDR1-223	ENST00000324771	SPATA31A5	Q5VU36	1347 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	SPATA31A7	Q8IWB4	1347 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	PRPF3	O43395	683 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	ZNF500	O60304	480 aa	Predicted RBP	13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	RPN1	P04843	607 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	GRIN1	Q05586	938 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	CCDC144B	Q3MJ40	725 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	SHC4	Q6S5L8	630 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	BRIP1	Q9BX63	1249 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	MORC3	Q14149	939 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	SRBD1	Q8N5C6	995 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	CCDC169	A6NNP5	214 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	TMEM110-MUSTN1	A8MSY1	372 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	KCNJ18	B7U540	433 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	KCNJ12	Q14500	433 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	CNNM4	Q6P4Q7	775 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	MRFAP1L1	Q96HT8	127 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	BCL2L12	Q9HB09	334 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	PRM3	Q9NNZ6	103 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	PCDHA4	Q9UN74	947 aa		13.22	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L15	C9J2P7	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L13	C9JLJ4	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L11	C9JVI0	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L18	D6R9N7	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L22	D6RA61	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L17	D6RBQ6	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L19	D6RCP7	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L20	D6RJB6	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	EIF3J	O75822	258 aa	Known RBP	13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L24	Q0WX57	530 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	CETN1	Q12798	172 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.21	□□□□□ -0.29	3e-6	■□□□□ 9
DDR1-223	ENST00000324771	ERCC6L	Q2NKX8	1250 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L6P	Q6QN14	398 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	ADGRA1	Q86SQ6	560 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	ALS2CR12	Q96Q35	445 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	LZTS2	Q9BRK4	669 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	TMEM260	Q9NX78	707 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	KIAA1024	Q9UPX6	916 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	HPS5	Q9UPZ3	1129 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	EN1	Q05925	392 aa	Predicted RBP	13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	SF3B3	Q15393	1217 aa	Known RBP	13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	KIAA1524	Q8TCG1	905 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	CNKSR1	Q969H4	720 aa		13.21	□□□□□ -0.29
DDR1-223	ENST00000324771	KRT86	O43790	486 aa		13.21	□□□□□ -0.3
DDR1-223	ENST00000324771	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.21	□□□□□ -0.3	8e-7	■■■■□ 24.7
DDR1-223	ENST00000324771	AOC3	Q16853	763 aa		13.21	□□□□□ -0.3
DDR1-223	ENST00000324771	GPBP1	Q86WP2	473 aa		13.21	□□□□□ -0.3
DDR1-223	ENST00000324771	MYCT1	Q8N699	235 aa		13.21	□□□□□ -0.3
DDR1-223	ENST00000324771	GOPC	Q9HD26	462 aa		13.21	□□□□□ -0.3
DDR1-223	ENST00000324771	DDX25	Q9UHL0	483 aa	Known RBP	13.21	□□□□□ -0.3
DDR1-223	ENST00000324771	PXDNL	A1KZ92	1463 aa		13.21	□□□□□ -0.3
DDR1-223	ENST00000324771	ARHGAP6	O43182	974 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	ZBTB7A	O95365	584 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	GCNT3	O95395	438 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	CASP14	P31944	242 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	GJC1	P36383	396 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	BAG6	P46379	1132 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	TYW1B	Q6NUM6	668 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	FBXO11	Q86XK2	927 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	MYRIP	Q8NFW9	859 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	CCDC113	Q9H0I3	377 aa		13.2	□□□□□ -0.3

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