RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 CASC1Q6TDU7 716 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 RIOX2Q8IUF8 465 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 REPS2Q8NFH8 660 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 DCAF4Q8WV16 495 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 TRIB2Q92519 343 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 ZKSCAN3Q9BRR0 538 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 ESYT1Q9BSJ8 1104 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 TEX13BQ9BXU2 312 aa17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 ZNF214Q9UL59 606 aaPredicted RBP17.25■□□□□ 0.35
TUBA3D-201ENST00000321253 FDX1P10109 184 aa17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 EN2P19622 333 aaPredicted RBP17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 KCTD1Q719H9 257 aa17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 DPP9Q86TI2 863 aa17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 NKX2-3Q8TAU0 364 aa17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 UNC93B1Q9H1C4 597 aa17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
TUBA3D-201ENST00000321253 GJB1P08034 283 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 CYP21A2P08686 494 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 FCER1AP12319 257 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 ADORA2AP29274 412 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 SNRNP48Q6IEG0 339 aaKnown RBP17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 ABRAQ8N0Z2 381 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 CPXCR1Q8N123 301 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 MAP4K1Q92918 833 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 ZSCAN10Q96SZ4 725 aaPredicted RBP17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 SLC38A10Q9HBR0 1119 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 ZSWIM5Q9P217 1185 aa17.23■□□□□ 0.35
TUBA3D-201ENST00000321253 PLA2G6O60733 806 aa17.22■□□□□ 0.35
TUBA3D-201ENST00000321253 HOXC6P09630 235 aa17.22■□□□□ 0.35
TUBA3D-201ENST00000321253 SLC4A3P48751 1232 aa17.22■□□□□ 0.35
TUBA3D-201ENST00000321253 MMP19Q99542 508 aa17.22■□□□□ 0.35
TUBA3D-201ENST00000321253 RBM8AQ9Y5S9 174 aaKnown RBP17.22■□□□□ 0.35
TUBA3D-201ENST00000321253 ZNF236Q9UL36 1845 aa17.22■□□□□ 0.35
TUBA3D-201ENST00000321253 TNKSO95271 1327 aa17.22■□□□□ 0.35
TUBA3D-201ENST00000321253 ATP2A1O14983 1001 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 CDC45O75419 566 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 OAZ1P54368 228 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 TRIM32Q13049 653 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 KCTD2Q14681 263 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 CCL14Q16627 93 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 MFSD14CQ5VZR4 134 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 RASGRP2Q7LDG7 609 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 KAT14Q9H8E8 782 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 HMX1Q9NP08 348 aaPredicted RBP17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 FRMPD2Q68DX3 1309 aaPredicted RBP17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 RPTORQ8N122 1335 aa17.21■□□□□ 0.35
TUBA3D-201ENST00000321253 PDHBP11177 359 aa17.21■□□□□ 0.34
TUBA3D-201ENST00000321253 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.34
TUBA3D-201ENST00000321253 GJA8P48165 433 aa17.21■□□□□ 0.34
TUBA3D-201ENST00000321253 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.34
TUBA3D-201ENST00000321253 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.21■□□□□ 0.34
TUBA3D-201ENST00000321253 PRR12Q9ULL5 1215 aa17.21■□□□□ 0.34
TUBA3D-201ENST00000321253 BRCA2P51587 3418 aa17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 E7EWF7 191 aa17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 NCOA7Q8NI08 942 aa17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 NPLOC4Q8TAT6 608 aa17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 U2AF1L4Q8WU68 220 aaKnown RBP17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 DEFB118Q96PH6 123 aa17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 GPCPD1Q9NPB8 672 aa17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
TUBA3D-201ENST00000321253 IFIT1BQ5T764 474 aaKnown RBP17.19■□□□□ 0.34
TUBA3D-201ENST00000321253 MAP3K21Q5TCX8 1036 aa17.19■□□□□ 0.34
TUBA3D-201ENST00000321253 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
TUBA3D-201ENST00000321253 FBXO40Q9UH90 709 aa17.19■□□□□ 0.34
TUBA3D-201ENST00000321253 RIPK3Q9Y572 518 aa17.19■□□□□ 0.34
TUBA3D-201ENST00000321253 ERICH2A1L162 156 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 COBLO75128 1261 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 SGPL1O95470 568 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 SLC16A2P36021 539 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 CACNB2Q08289 660 aaPredicted RBP17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 ZNF543Q08ER8 600 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 GPATCH4Q5T3I0 446 aaKnown RBP17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 SYDE2Q5VT97 1194 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 TTBK2Q6IQ55 1244 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 CYB5R4Q7L1T6 521 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 CHST13Q8NET6 341 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 FLRT1Q9NZU1 646 aa17.18■□□□□ 0.34
TUBA3D-201ENST00000321253 TFRCP02786 760 aaKnown RBP17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 SNHG28P0DPA3 235 aa17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 CAPN2P17655 700 aa17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 SART3Q15020 963 aaKnown RBP17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 OLFML2BQ68BL8 750 aa17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 BTNL9Q6UXG8 535 aa17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 SHISA4Q96DD7 197 aa17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 DDX11Q96FC9 970 aa17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 TAF6LQ9Y6J9 622 aa17.17■□□□□ 0.34
TUBA3D-201ENST00000321253 IFIT3O14879 490 aaKnown RBP17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 PGK2P07205 417 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 CYP2C19P33261 490 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms